Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of PedR in Synechococcus sp. PCC 7002

Properties
Regulator type: Transcription factor
TF locus tag: SYNPCC7002_A0641
Regulator family: LuxR
Regulation mode: repressor (activator)
Biological process: Photosynthesis; Carbon fixation
Effector: Trx, thioredoxin protein
Regulog: PedR - Cyanobacteria
Statistics of regulated genes:
- Genes 5
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 56 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -257
Score: 3.7
Sequence: AAGAAAGTTTATCT
Locus tag: SYNPCC7002_A0641
Name: pedR
Funciton: Thioredoxin status sensitive transcription regulator, LuxR family
pedR
Thioredoxin status sensitive transcription regulator, LuxR family

Position: -217
Score: 5
Sequence: AAGTAATTATACCC
Locus tag: SYNPCC7002_A1219
Name: slr1957
Funciton: Conserved hypothetical protein
slr1957
Conserved hypothetical protein

Position: -14
Score: 4.6
Sequence: GAGTAAAAATACCT
Locus tag: SYNPCC7002_A1652
Name: chlB
Funciton: Light-independent protochlorophyllide reductase subunit B
chlB
Light-independent protochlorophyllide reductase subunit B

Position: -20
Score: 4.5
Sequence: AAGTATTTTTTCCT
Locus tag: SYNPCC7002_A1973
Name: ndhD
Funciton: NADH dehydrogenase subunit
ndhD
NADH dehydrogenase subunit

Position: -63
Score: 4.1
Sequence: AAGCATAAATTCCC
Locus tag: SYNPCC7002_A1792
Name: sll0296
Funciton: Conserved hypothetical protein
sll0296
Conserved hypothetical protein
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