Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of PedR in Nostoc sp. PCC 7120

Properties
Regulator type: Transcription factor
TF locus tag: asl2551
Regulator family: LuxR
Regulation mode: repressor (activator)
Biological process: Photosynthesis; Carbon fixation
Effector: Trx, thioredoxin protein
Regulog: PedR - Cyanobacteria
Statistics of regulated genes:
- Genes 7
- Operons 7
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 56 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -160
Score: 4.2
Sequence: GAGTATTTATTCCT
Position: -119
Score: 4.1
Sequence: GAGTATAAATTCCT
Position: -59
Score: 4.3
Sequence: AAGTAACAATTCCT
Locus tag: alr0348
Name: ndhD
Funciton: NADH dehydrogenase subunit
ndhD
NADH dehydrogenase subunit

Position: -194
Score: 4.5
Sequence: AAGTATATTTAATT
Position: -33
Score: 4.6
Sequence: AAGTACATATACCA
Locus tag: asl2551
Name: pedR
Funciton: Thioredoxin status sensitive transcription regulator, LuxR family
pedR
Thioredoxin status sensitive transcription regulator, LuxR family

Position: -23
Score: 4.5
Sequence: AAGTATTTTTGCTT
Locus tag: alr5050
Name: ndhD2
Funciton: NADH dehydrogenase subunit
ndhD2
NADH dehydrogenase subunit

Position: -7
Score: 3.7
Sequence: AAGCAAAATGACCA
Locus tag: all5076
Name: chlN
Funciton: Light-independent protochlorophyllide reductase subunit N
chlN
Light-independent protochlorophyllide reductase subunit N

Position: -56
Score: 3.7
Sequence: AAGCACTTATAGTC
Locus tag: alr3441
Name: chlB
Funciton: Light-independent protochlorophyllide reductase subunit B
chlB
Light-independent protochlorophyllide reductase subunit B

Position: -157
Score: 4.3
Sequence: AAGCATGAATACTA
Locus tag: all2740
Name: slr1957
Funciton: Conserved hypothetical protein
slr1957
Conserved hypothetical protein

Position: -263
Score: 4.2
Sequence: AAGCATCAATACCG
Locus tag: alr0782
Name: rpe
Funciton: Ribulose-phosphate 3-epimerase
rpe
Ribulose-phosphate 3-epimerase
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