Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of PedR in Cyanothece sp. ATCC 51142

Properties
Regulator type: Transcription factor
TF locus tag: cce_4720
Regulator family: LuxR
Regulation mode: repressor (activator)
Biological process: Photosynthesis; Carbon fixation
Effector: Trx, thioredoxin protein
Regulog: PedR - Cyanobacteria
Statistics of regulated genes:
- Genes 5
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 56 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -365
Score: 4.9
Sequence: AAGTAAGTTTACCT
Locus tag: cce_4534
Name: chlN
Funciton: Light-independent protochlorophyllide reductase subunit N
chlN
Light-independent protochlorophyllide reductase subunit N

Position: -166
Score: 4.5
Sequence: AAGCATATCTACTT
Locus tag: cce_2950
Name: slr1957
Funciton: Conserved hypothetical protein
slr1957
Conserved hypothetical protein

Position: -155
Score: 4.3
Sequence: AAGCAATTTTTCTC
Locus tag: cce_4532
Name: chlL
Funciton: Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein
chlL
Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein

Position: -29
Score: 4.7
Sequence: AAGTAAATGTACTA
Locus tag: cce_4720
Name: pedR
Funciton: Thioredoxin status sensitive transcription regulator, LuxR family
pedR
Thioredoxin status sensitive transcription regulator, LuxR family

Position: -19
Score: 4.2
Sequence: GAGTATTTATTCCT
Locus tag: cce_3522
Name: ndhD
Funciton: NADH dehydrogenase subunit
ndhD
NADH dehydrogenase subunit
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD