Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of KdgR in Bacillus pumilus SAFR-032

Properties
Regulator type: Transcription factor
TF locus tag: BPUM_3245
Regulator family: LacI
Regulation mode: repressor
Biological process: Galacturonate utilization; Glucuronate utilization
Effector: 2-keto-3-deoxygluconate
Regulog: KdgR - Bacillales
Statistics of regulated genes:
- Genes 5
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 13 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -226
Score: 5.5
Sequence: TTCGAAACCGATTTCAAA
Position: -65
Score: 5.8
Sequence: CTTGAAACCGATACCAAA
Locus tag: BPUM_3246
Name: kduI
Funciton: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
Locus tag: BPUM_3247
Name: kduD
Funciton: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
kduD
2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)

Position: -33
Score: 6
Sequence: TTTGAAACCGGTACCAAG
Locus tag: BPUM_3244
Name: kdgK
Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
Locus tag: BPUM_3243
Name: kdgA
Funciton: 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
kdgK
2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
kdgA
4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)

Position: -215
Score: 5.8
Sequence: TTTGGTATCGGTTTCAAG
Position: -54
Score: 5.5
Sequence: TTTGAAATCGGTTTCGAA
Locus tag: BPUM_3245
Name: kdgR
Funciton: Transcriptional regulator of pectin utilization, LacI family
kdgR
Transcriptional regulator of pectin utilization, LacI family
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD