Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of CcmR in Synechococcus sp. JA-3-3Ab

Properties
Regulator type: Transcription factor
TF locus tag: CYA_1081
Regulator family: LysR
Regulation mode: repressor
Biological process: Carbon dioxide fixation
Effector:
Regulog: CcmR - Cyanobacteria
Statistics of regulated genes:
- Genes 5
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 72 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -185
Score: 4.2
Sequence: ATAAACGGAAGTCTAT
Position: -153
Score: 4.4
Sequence: ATTGTATTGTTTCTAT
Locus tag: CYA_0894
Name: cmpA
Funciton: Bicarbontate ABC transporter, substrate-binding protein
cmpA
Bicarbontate ABC transporter, substrate-binding protein

Position: -107
Score: 5
Sequence: CTTGATTTTTGTCTAT
Locus tag: CYA_0640
Name: ndhF3
Funciton: NADH dehydrogenase subunit F
Locus tag: CYA_0639
Name: ndhD3
Funciton: NADH dehydrogenase subunit D
Locus tag: CYA_0638
Name: cupA
Funciton: CO2 uptake protein
Locus tag: CYA_0636
Name: cupS
Funciton: CO2 uptake transporter, small subunit
ndhF3
NADH dehydrogenase subunit F
ndhD3
NADH dehydrogenase subunit D
cupA
CO2 uptake protein
cupS
CO2 uptake transporter, small subunit
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD