Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of CcmR in Synechococcus elongatus PCC 7942

Properties
Regulator type: Transcription factor
TF locus tag: Synpcc7942_1310
Regulator family: LysR
Regulation mode: repressor
Biological process: Carbon dioxide fixation
Effector:
Regulog: CcmR - Cyanobacteria
Statistics of regulated genes:
- Genes 6
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 72 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -186
Score: 4.9
Sequence: ATTGACTTAGCTCTAT
Locus tag: Synpcc7942_1488
Name: cmpA
Funciton: Bicarbontate ABC transporter, substrate-binding protein
Locus tag: Synpcc7942_1489
Name: cmpB
Funciton: Bicarbontate ABC transporter, permease protein
Locus tag: Synpcc7942_1490
Name: cmpC
Funciton: Bicarbontate ABC transporter, ATP-binding protein 1
Locus tag: Synpcc7942_1491
Name: cmpD
Funciton: Bicarbontate ABC transporter, ATP-binding protein 2
cmpA
Bicarbontate ABC transporter, substrate-binding protein
cmpB
Bicarbontate ABC transporter, permease protein
cmpC
Bicarbontate ABC transporter, ATP-binding protein 1
cmpD
Bicarbontate ABC transporter, ATP-binding protein 2

Position: -34
Score: 5.7
Sequence: ATAGACTTAAATCTAT
Locus tag: Synpcc7942_1310
Name: ccmR
Funciton: Carbon assimilation transcriptional regulator, LysR family
ccmR
Carbon assimilation transcriptional regulator, LysR family

Position: -207
Score: 4.6
Sequence: ATAGACAGGAATCTAT
Locus tag: Synpcc7942_1475
Name: sbtA
Funciton: High-affinity, low-flux sodium dependent bicarbonate transporter
sbtA
High-affinity, low-flux sodium dependent bicarbonate transporter
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD