Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of CcmR in Microcystis aeruginosa NIES-843

Properties
Regulator type: Transcription factor
TF locus tag: MAE_62070, MAE_15110
Regulator family: LysR
Regulation mode: repressor
Biological process: Carbon dioxide fixation
Effector:
Regulog: CcmR - Cyanobacteria
Statistics of regulated genes:
- Genes 14
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 72 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -71
Score: 4.9
Sequence: ATAGACTTTTGACTGT
Locus tag: MAE_30020
Name: glpX
Funciton: Fructose-1,6-bisphosphatase II
glpX
Fructose-1,6-bisphosphatase II

Position: -238
Score: 4.3
Sequence: ATAGACAAAACTTTAT
Position: -207
Score: 4.9
Sequence: ATTGTTATAAATCTAT
Position: -122
Score: 4.9
Sequence: ATTGATTTAAACCTAT
Locus tag: MAE_62070
Name: ccmR
Funciton: Carbon assimilation transcriptional regulator, LysR family
ccmR
Carbon assimilation transcriptional regulator, LysR family

Position: -71
Score: 4.9
Sequence: ATTGACTAGAATCTAT
Locus tag: MAE_15110
Name: ccmR
Funciton: Carbon assimilation transcriptional regulator, LysR family
Locus tag: MAE_15120
Name: ndhF3
Funciton: NADH dehydrogenase subunit F
Locus tag: MAE_15130
Name: ecaB2
Funciton: Periplasmic carbonic anhydrase
Locus tag: MAE_15140
Name: ndhD3
Funciton: NADH dehydrogenase subunit D
ccmR
Carbon assimilation transcriptional regulator, LysR family
ndhF3
NADH dehydrogenase subunit F
ecaB2
Periplasmic carbonic anhydrase
ndhD3
NADH dehydrogenase subunit D

Position: -104
Score: 4.6
Sequence: ATAGCTAAATTTCTAT
Locus tag: MAE_19990
Name: cmpA
Funciton: Bicarbontate ABC transporter, substrate-binding protein
Locus tag: MAE_20000
Name: cmpB
Funciton: Bicarbontate ABC transporter, permease protein
Locus tag: MAE_20010
Name: cmpC
Funciton: Bicarbontate ABC transporter, ATP-binding protein 1
Locus tag: MAE_20020
Name: cmpD
Funciton: Bicarbontate ABC transporter, ATP-binding protein 2
cmpA
Bicarbontate ABC transporter, substrate-binding protein
cmpB
Bicarbontate ABC transporter, permease protein
cmpC
Bicarbontate ABC transporter, ATP-binding protein 1
cmpD
Bicarbontate ABC transporter, ATP-binding protein 2

Position: -196
Score: 4.7
Sequence: ATAGGTTTAAATCAAT
Position: -111
Score: 4.9
Sequence: ATAGATTTATAACAAT
Position: -80
Score: 5
Sequence: ATAAAGTTTTGTCTAT
Locus tag: MAE_62080
Name: Synpcc7942_2328
Funciton: Predicted permease
Locus tag: MAE_62090
Name: sbtA
Funciton: High-affinity, low-flux sodium dependent bicarbonate transporter
Locus tag: MAE_62100
Name: sbtB
Funciton: Predicted membrane protein
Locus tag: MAE_62110
Name: nhaS
Funciton: Predicted sodium/hydrogen exchanger
Synpcc7942_2328
Predicted permease
sbtA
High-affinity, low-flux sodium dependent bicarbonate transporter
sbtB
Predicted membrane protein
nhaS
Predicted sodium/hydrogen exchanger
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD