Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of CcmR in Gloeobacter violaceus PCC 7421

Properties
Regulator type: Transcription factor
TF locus tag: gll1001
Regulator family: LysR
Regulation mode: repressor
Biological process: Carbon dioxide fixation
Effector:
Regulog: CcmR - Cyanobacteria
Statistics of regulated genes:
- Genes 10
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 72 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -34
Score: 5.2
Sequence: ATAGAACTATGTCTAT
Locus tag: gll1001
Name: ccmR
Funciton: Carbon assimilation transcriptional regulator, LysR family
ccmR
Carbon assimilation transcriptional regulator, LysR family

Position: -139
Score: 5
Sequence: ATCTACTTTTATCTAT
Locus tag: gvip132
Name: ndhF3
Funciton: NADH dehydrogenase subunit F
Locus tag: gvip133
Name: ndhD3
Funciton: NADH dehydrogenase subunit D
Locus tag: gvip134
Name: cupA
Funciton: CO2 uptake protein
Locus tag: glr1006
Name: cupS
Funciton: CO2 uptake transporter, small subunit
ndhF3
NADH dehydrogenase subunit F
ndhD3
NADH dehydrogenase subunit D
cupA
CO2 uptake protein
cupS
CO2 uptake transporter, small subunit

Position: -168
Score: 5.6
Sequence: ATAGATTAATATCTAT
Position: -136
Score: 5
Sequence: ATCGACTTTTCTCTAT
Locus tag: gvip279
Name: cmpA
Funciton: Bicarbontate ABC transporter, substrate-binding protein
Locus tag: gvip280
Name: cmpB
Funciton: Bicarbontate ABC transporter, permease protein
Locus tag: gvip281
Name: ecaB
Funciton: Periplasmic carbonic anhydrase
Locus tag: gvip282
Name: cmpC
Funciton: Bicarbontate ABC transporter, ATP-binding protein 1
Locus tag: gvip283
Name: cmpD
Funciton: Bicarbontate ABC transporter, ATP-binding protein 2
cmpA
Bicarbontate ABC transporter, substrate-binding protein
cmpB
Bicarbontate ABC transporter, permease protein
ecaB
Periplasmic carbonic anhydrase
cmpC
Bicarbontate ABC transporter, ATP-binding protein 1
cmpD
Bicarbontate ABC transporter, ATP-binding protein 2
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
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