Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of NarP in Yersinia pestis KIM

Properties
Regulator type: Transcription factor
TF locus tag: y1441
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrate; Nitrite
Regulog: NarP - Enterobacteriales
Statistics of regulated genes:
- Genes 16
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 125 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -112
Score: 4.8
Sequence: TACCTCTATAAGGGTA
Locus tag: y1567
Name: ccmA
Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: y1568
Name: ccmB
Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: y1569
Name: ccmC
Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: y1570
Name: ccmD
Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: y1571
Name: ccmE
Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: y1572
Name: ccmF
Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: y1573
Name: ccmG
Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: y1574
Name: ccmH
Funciton: Cytochrome c heme lyase, subunit CcmH
Locus tag: y1575
Name: ccmH
Funciton: Cytochrome c heme lyase, subunit CcmH
ccmA
ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
ccmB
ABC transporter involved in cytochrome c biogenesis, CcmB subunit
ccmC
Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
ccmD
Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
ccmE
Cytochrome c-type biogenesis protein CcmE, heme chaperone
ccmF
Cytochrome c heme lyase, subunit CcmF
ccmG
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
ccmH
Cytochrome c heme lyase, subunit CcmH
ccmH
Cytochrome c heme lyase, subunit CcmH

Position: -108
Score: 4.4
Sequence: TACCCACTTGGAGTTA
Locus tag: y0652
Name: dnrN
Funciton: Nitric oxide-dependent regulator DnrN
dnrN
Nitric oxide-dependent regulator DnrN

Position: -260
Score: 4
Sequence: TACCTAAGAATAGTTA
Locus tag: y2023
Name: adhE
Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
adhE
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)

Position: -43
Score: 4.7
Sequence: TACTCATTTGTAGGTA
Locus tag: y2044
Name: ompW
Funciton: Outer membrane protein W precursor
ompW
Outer membrane protein W precursor

Position: -100
Score: 4.5
Sequence: TACCACCTTAGAGGTA
Locus tag: y3945
Name: nirB
Funciton: Nitrite reductase large subunit (EC 1.7.1.4)
Locus tag: y3944
Name: nirD
Funciton: Nitrite reductase small subunit (EC 1.7.1.4)
nirB
Nitrite reductase large subunit (EC 1.7.1.4)
nirD
Nitrite reductase small subunit (EC 1.7.1.4)

Position: -158
Score: 4.3
Sequence: TACTCATTATTCGGTA
Locus tag: y1442
Name: napF
Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapF
Locus tag: y1443
Name: napD
Funciton: Periplasmic nitrate reductase component NapD
napF
Periplasmic nitrate reductase, ferredoxin-type protein NapF
napD
Periplasmic nitrate reductase component NapD
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