Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of NarP in Edwardsiella tarda EIB202

Properties
Regulator type: Transcription factor
TF locus tag: ETAE_1111
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrate; Nitrite
Regulog: NarP - Enterobacteriales
Statistics of regulated genes:
- Genes 29
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 125 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -169
Score: 4.1
Sequence: TTCCTCTTTTGGGTTA
Locus tag: ETAE_1112
Name: narQ
Funciton: Nitrate/nitrite sensor kinase NarQ (EC 2.7.3.-)
Locus tag: ETAE_1111
Name: narP
Funciton: Nitrate/nitrite response regulator protein NarP, LuxR family
narQ
Nitrate/nitrite sensor kinase NarQ (EC 2.7.3.-)
narP
Nitrate/nitrite response regulator protein NarP, LuxR family

Position: -64
Score: 4.4
Sequence: TACCCCGAATGAGTTA
Locus tag: ETAE_2461
Name: ccmA
Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: ETAE_2460
Name: ccmB
Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: ETAE_2459
Name: ccmC
Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: ETAE_2458
Name: ccmD
Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: ETAE_2457
Name: ccmE
Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: ETAE_2456
Name: ccmF
Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: ETAE_2455
Name: ccmG
Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: ETAE_2454
Name: ccmH
Funciton: Cytochrome c heme lyase, subunit CcmH
Locus tag: ETAE_2453
Name: ccmH
Funciton: Cytochrome c heme lyase, subunit CcmH
ccmA
ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
ccmB
ABC transporter involved in cytochrome c biogenesis, CcmB subunit
ccmC
Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
ccmD
Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
ccmE
Cytochrome c-type biogenesis protein CcmE, heme chaperone
ccmF
Cytochrome c heme lyase, subunit CcmF
ccmG
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
ccmH
Cytochrome c heme lyase, subunit CcmH
ccmH
Cytochrome c heme lyase, subunit CcmH

Position: -156
Score: 3.9
Sequence: TAACCCAAAAGAGGAA
Locus tag: ETAE_1114
Name: napF
Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapF
Locus tag: ETAE_1115
Name: napD
Funciton: Periplasmic nitrate reductase component NapD
Locus tag: ETAE_1116
Name: napA
Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: ETAE_1117
Name: napG
Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapG
Locus tag: ETAE_1118
Name: napH
Funciton: Periplasmic nitrate reductase, polyferredoxin NapH
Locus tag: ETAE_1119
Name: napB
Funciton: Nitrate reductase cytochrome c550-type subunit
Locus tag: ETAE_1120
Name: napC
Funciton: Cytochrome c-type protein NapC
napF
Periplasmic nitrate reductase, ferredoxin-type protein NapF
napD
Periplasmic nitrate reductase component NapD
napA
Periplasmic nitrate reductase precursor (EC 1.7.99.4)
napG
Periplasmic nitrate reductase, ferredoxin-type protein NapG
napH
Periplasmic nitrate reductase, polyferredoxin NapH
napB
Nitrate reductase cytochrome c550-type subunit
napC
Cytochrome c-type protein NapC

Position: -52
Score: 3.7
Sequence: TCACTCAATATGGTTA
Locus tag: ETAE_1528
Name: ompW
Funciton: Outer membrane protein W precursor
ompW
Outer membrane protein W precursor

Position: -239
Score: 4.4
Sequence: TACCCAAGAATGAGTA
Locus tag: ETAE_1508
Name: adhE
Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
adhE
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)

Position: -156
Score: 4.4
Sequence: TACCTCCTGGGGGGTA
Locus tag: ETAE_3526
Name: atpI
Funciton: ATP synthase maturation
Locus tag: ETAE_3527
Name: atpB
Funciton: ATP synthase, F0 complex, A chain (EC 3.6.3.14)
Locus tag: ETAE_3528
Name: atpE
Funciton: ATP synthase, F0 complex, C chain (EC 3.6.3.14)
Locus tag: ETAE_3529
Name: atpF
Funciton: ATP synthase, F0 complex, B chain (EC 3.6.3.14)
Locus tag: ETAE_3530
Name: atpH
Funciton: ATP synthase, F1 complex, delta chain (EC 3.6.3.14)
Locus tag: ETAE_3531
Name: atpA
Funciton: ATP synthase, F1 complex, alpha chain (EC 3.6.3.14)
Locus tag: ETAE_3532
Name: atpG
Funciton: ATP synthase, F1 complex, gamma chain (EC 3.6.3.14)
Locus tag: ETAE_3533
Name: atpD
Funciton: ATP synthase, F1 complex, beta chain (EC 3.6.3.14)
Locus tag: ETAE_3534
Name: atpC
Funciton: ATP synthase, F1 complex, epsilon chain (EC 3.6.3.14)
atpI
ATP synthase maturation
atpB
ATP synthase, F0 complex, A chain (EC 3.6.3.14)
atpE
ATP synthase, F0 complex, C chain (EC 3.6.3.14)
atpF
ATP synthase, F0 complex, B chain (EC 3.6.3.14)
atpH
ATP synthase, F1 complex, delta chain (EC 3.6.3.14)
atpA
ATP synthase, F1 complex, alpha chain (EC 3.6.3.14)
atpG
ATP synthase, F1 complex, gamma chain (EC 3.6.3.14)
atpD
ATP synthase, F1 complex, beta chain (EC 3.6.3.14)
atpC
ATP synthase, F1 complex, epsilon chain (EC 3.6.3.14)
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