Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of AraR in Bacillus amyloliquefaciens FZB42

Properties
Regulator type: Transcription factor
TF locus tag: RBAM_031330
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Arabinose utilization
Effector: Arabinose
Regulog: AraR - Bacillales
Statistics of regulated genes:
- Genes 13
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 43 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -152
Score: 5.4
Sequence: TTATTTGTGCGTACTAATTT
Position: -109
Score: 5.6
Sequence: TCATAAGTACGTACAAATGT
Locus tag: RBAM_031320
Name: araE
Funciton: L-arabinose-proton symporter
araE
L-arabinose-proton symporter

Position: -105
Score: 5.2
Sequence: TTTTTTGTCTGTACAAATAT
Locus tag: RBAM_025870
Name: abnA
Funciton: Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99)
abnA
Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99)

Position: -167
Score: 5.6
Sequence: ACATTTGTACGTACTTATGA
Position: -124
Score: 5.4
Sequence: AAATTAGTACGCACAAATAA
Locus tag: RBAM_031330
Name: araR
Funciton: Transcriptional repressor of arabinoside utilization, GntR family
araR
Transcriptional repressor of arabinoside utilization, GntR family

Position: -99
Score: 5.8
Sequence: AAAATTGTTCGTACAAATAA
Position: -57
Score: 5.3
Sequence: ATATTCGTACGTATATTTTT
Locus tag: RBAM_025860
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: RBAM_025850
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: RBAM_025840
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: RBAM_025830
Name: araL
Funciton: L-arabinose utilization protein
Locus tag: RBAM_025820
Name: egsA
Funciton: Glycerol-1-phosphate dehydrogenase [NAD(P)] (EC 1.1.1.261)
Locus tag: RBAM_025810
Name: araN
Funciton: Alpha-arabinosides ABC transport system, substrate-binding protein
Locus tag: RBAM_025800
Name: araP
Funciton: Alpha-arabinosides ABC transport system, permease protein 1
Locus tag: RBAM_025790
Name: araQ
Funciton: Alpha-arabinosides ABC transport system, permease protein 2
Locus tag: RBAM_025780
Name: abfA
Funciton: Alpha-N-arabinofuranosidase (EC 3.2.1.55)
araA
L-arabinose isomerase (EC 5.3.1.4)
araB
Ribulokinase (EC 2.7.1.16)
araD
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
araL
L-arabinose utilization protein
egsA
Glycerol-1-phosphate dehydrogenase [NAD(P)] (EC 1.1.1.261)
araN
Alpha-arabinosides ABC transport system, substrate-binding protein
araP
Alpha-arabinosides ABC transport system, permease protein 1
araQ
Alpha-arabinosides ABC transport system, permease protein 2
abfA
Alpha-N-arabinofuranosidase (EC 3.2.1.55)

Position: -169
Score: 5.6
Sequence: TAATTGGTTCGTACAAATTA
Locus tag: RBAM_025570
Name: xsa
Funciton: Alpha-N-arabinofuranosidase 2 (EC 3.2.1.55)
xsa
Alpha-N-arabinofuranosidase 2 (EC 3.2.1.55)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD