Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of ExuR in Citrobacter koseri ATCC BAA-895

Properties
Regulator type: Transcription factor
TF locus tag: CKO_04496
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Galacturonate utilization
Effector: Galacturonate
Regulog: ExuR - Enterobacteriales
Statistics of regulated genes:
- Genes 10
- Operons 8
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 48 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -34
Score: 4.5
Sequence: CAGGTTGTATGACTAATTA
Locus tag: CKO_01541
Name: uxaB
Funciton: Altronate oxidoreductase (EC 1.1.1.58)
uxaB
Altronate oxidoreductase (EC 1.1.1.58)

Position: -8
Score: 6.2
Sequence: AAATTGGTGTGATAACTTT
Locus tag: CKO_04494
Name: uxaC
Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: CKO_04493
Name: uxaA
Funciton: Altronate hydrolase (EC 4.2.1.7)
uxaC
Uronate isomerase (EC 5.3.1.12)
uxaA
Altronate hydrolase (EC 4.2.1.7)

Position: -47
Score: 6
Sequence: AAAGTGGTATAACAAATAT
Locus tag: CKO_04496
Name: exuR
Funciton: D-galacturonate transcriptional repressor, GntR family
exuR
D-galacturonate transcriptional repressor, GntR family

Position: -227
Score: 5.7
Sequence: GAAGTTGTATGACAAGTTA
Locus tag: CKO_04495
Name: exuT
Funciton: Hexuronate transporter
exuT
Hexuronate transporter

Position: -157
Score: 5.8
Sequence: TAAGTTGTGTGACAAGTTC
Locus tag: CKO_02295
Name: lfaR
Funciton: putative transcriptional regulator, LacI family
lfaR
putative transcriptional regulator, LacI family

Position: -59
Score: 4.6
Sequence: AAATTTGTGTGACACCAAA
Locus tag: CKO_02296
Name: lfaT
Funciton: Putative MFS superfamily hexuronate transporter
Locus tag: CKO_02297
Name: lfaA
Funciton: Alpha-glucosidase (EC 3.2.1.20)
lfaT
Putative MFS superfamily hexuronate transporter
lfaA
Alpha-glucosidase (EC 3.2.1.20)

Position: -191
Score: 4.4
Sequence: AAGTTGTTATACCAAATTA
Locus tag: CKO_00608
Name: uxuB
Funciton: D-mannonate oxidoreductase (EC 1.1.1.57)
uxuB
D-mannonate oxidoreductase (EC 1.1.1.57)

Position: -31
Score: 5.3
Sequence: AATTTGGTATAACAACTTG
Locus tag: CKO_00609
Name: uxuA
Funciton: Mannonate dehydratase (EC 4.2.1.8)
uxuA
Mannonate dehydratase (EC 4.2.1.8)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD