Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of Crp in Trichodesmium erythraeum IMS101

Properties
Regulator type: Transcription factor
TF locus tag: Tery_1557
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process:
Effector: Cyclic 3',5'-AMP
Regulog: Crp - Cyanobacteria
Statistics of regulated genes:
- Genes 16
- Operons 12
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 106 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -98
Score: 4.2
Sequence: AGTGACTCAAGTCAAC
Locus tag: Tery_4143
Name: hesA
Funciton: Nitrogen fixation related protein
hesA
Nitrogen fixation related protein

Position: -193
Score: 4
Sequence: TGTAACCTAAAACAAA
Position: -93
Score: 3.9
Sequence: TCTGAGAAATATCAAA
Locus tag: Tery_1779
Name: coxB
Funciton: Cytochrome c oxidase subunit 2 (EC 1.9.3.1)
Locus tag: Tery_1778
Name: coxA
Funciton: Cytochrome c oxidase subunit 1 (EC 1.9.3.1)
coxB
Cytochrome c oxidase subunit 2 (EC 1.9.3.1)
coxA
Cytochrome c oxidase subunit 1 (EC 1.9.3.1)

Position: 21
Score: 4.3
Sequence: ACTGATTTTATTCATA
Locus tag: Tery_4140
Name: nifX
Funciton: Nitrogen fixation protein
Locus tag: Tery_4141
Name: nifK1
Funciton: Nitrogen fixation protein
Locus tag: Tery_4142
Name: nifW
Funciton: Nitrogenase-stabilizing/protective protein
nifX
Nitrogen fixation protein
nifK1
Nitrogen fixation protein
nifW
Nitrogenase-stabilizing/protective protein

Position: -345
Score: 4
Sequence: AATGATCAAAATTATA
Locus tag: Tery_3463
Name: cce_0244
Funciton: Conserved hypothetical protein
cce_0244
Conserved hypothetical protein

Position: -356
Score: 3.7
Sequence: TATGACTTATAGCATG
Locus tag: Tery_4133
Name: nifB
Funciton: FeMo nitrogenase cofactor biosynthesis protein
nifB
FeMo nitrogenase cofactor biosynthesis protein

Position: -410
Score: 3.6
Sequence: TATGATAATTCTCAAG
Locus tag: Tery_4030
Name: gap2
Funciton: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)
gap2
Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)

Position: -99
Score: 3.9
Sequence: CATGGTTTTAATCATA
Locus tag: Tery_2155
Name: slr1503
Funciton: Predicted aldo/keto reductase
slr1503
Predicted aldo/keto reductase

Position: -50
Score: 4.7
Sequence: AATGATCTTAATCAAA
Locus tag: Tery_0156
Name: SYNPCC7002_A2113
Funciton: Transglutaminase-like protein
SYNPCC7002_A2113
Transglutaminase-like protein

Position: -237
Score: 3.9
Sequence: AATGATAGAGTTCACG
Locus tag: Tery_1519
Name: ppa
Funciton: inorganic pyrophosphatase
ppa
inorganic pyrophosphatase

Position: -259
Score: 4.2
Sequence: CATGATCAAAGTCAAG
Locus tag: Tery_1557
Name: crp
Funciton: cAMP responsive transcription regulator, Fnr-Crp family
Locus tag: Tery_1556
Name: sll1372
Funciton: Predicted membrane protein
crp
cAMP responsive transcription regulator, Fnr-Crp family
sll1372
Predicted membrane protein

Position: 5
Score: 4.2
Sequence: AATGTTTAAGATCACA
Locus tag: Tery_3647
Name: apcC
Funciton: Phycobilisome linker polypeptide, allophycocyanin-associated
apcC
Phycobilisome linker polypeptide, allophycocyanin-associated

Position: -118
Score: 4.1
Sequence: TGTGTTTGATATCACA
Locus tag: Tery_3916
Name: sigF
Funciton: RNA polymerase sigma-37
sigF
RNA polymerase sigma-37
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