Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of Crp in Cyanothece sp. PCC 8801

Properties
Regulator type: Transcription factor
TF locus tag: PCC8801_0890
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process:
Effector: Cyclic 3',5'-AMP
Regulog: Crp - Cyanobacteria
Statistics of regulated genes:
- Genes 21
- Operons 16
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 106 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -74
Score: 4.8
Sequence: AGTGATCTGGGTCACA
Locus tag: PCC8801_2372
Name: murF
Funciton: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10)
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10)

Position: -155
Score: 3.7
Sequence: TTTGATCAATTTGACA
Locus tag: PCC8801_3186
Name: serS
Funciton: Seryl-tRNA synthetase (EC 6.1.1.11)
serS
Seryl-tRNA synthetase (EC 6.1.1.11)

Position: 21
Score: 4.3
Sequence: AGTGACAATGTTCATA
Locus tag: PCC8801_1790
Name: nifX
Funciton: Nitrogen fixation protein
Locus tag: PCC8801_1791
Name: nifK1
Funciton: Nitrogen fixation protein
Locus tag: PCC8801_1792
Name: nifK2
Funciton: Nitrogen fixation protein
Locus tag: PCC8801_1793
Name: nifW
Funciton: Nitrogenase-stabilizing/protective protein
Locus tag: PCC8801_1794
Name: hesA
Funciton: Nitrogen fixation related protein
Locus tag: PCC8801_1795
Name: hesB
Funciton: Nitrogen fixation related protein
nifX
Nitrogen fixation protein
nifK1
Nitrogen fixation protein
nifK2
Nitrogen fixation protein
nifW
Nitrogenase-stabilizing/protective protein
hesA
Nitrogen fixation related protein
hesB
Nitrogen fixation related protein

Position: -41
Score: 3.8
Sequence: GTTGATTTAAGTCCTA
Locus tag: PCC8801_0414
Name: sufR
Funciton: Iron-sulfur cluster biogenesis regulator, DeoR family
sufR
Iron-sulfur cluster biogenesis regulator, DeoR family

Position: -153
Score: 3.8
Sequence: TTTGATCTCGATCATT
Locus tag: PCC8801_0091
Name: SYNPCC7002_A0687
Funciton: Conserved hypothetical protein
SYNPCC7002_A0687
Conserved hypothetical protein

Position: -80
Score: 3.9
Sequence: TTTGAAAATTATCACC
Locus tag: PCC8801_1783
Name: nifS
Funciton: Cysteine desulfurase (EC 2.8.1.7)
nifS
Cysteine desulfurase (EC 2.8.1.7)

Position: -250
Score: 4.3
Sequence: TTTGATTTAATTCAAC
Locus tag: PCC8801_3705
Name: chlA-II
Funciton: Magnesium-protoporphyrin IX monomethyl ester cyclase 2 (EC 1.14.13.81)
chlA-II
Magnesium-protoporphyrin IX monomethyl ester cyclase 2 (EC 1.14.13.81)

Position: -31
Score: 4
Sequence: ATTGAGCTAAAGCATA
Locus tag: PCC8801_2557
Name: gap2
Funciton: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)
gap2
Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.59)

Position: -203
Score: 4.3
Sequence: GGTGACAGAAATCAAA
Locus tag: PCC8801_3887
Name: ackA
Funciton: Acetate kinase (EC 2.7.2.1)
ackA
Acetate kinase (EC 2.7.2.1)

Position: -199
Score: 4.2
Sequence: ACTGATTTAATTCACT
Locus tag: PCC8801_1006
Name: cupS
Funciton: Carbon dioxide uptake protein
cupS
Carbon dioxide uptake protein

Position: -35
Score: 4.6
Sequence: TGTGAGCTAAATCACT
Locus tag: PCC8801_0019
Name: slr1503
Funciton: Predicted aldo/keto reductase
slr1503
Predicted aldo/keto reductase

Position: -115
Score: 4.2
Sequence: ATTGATATTAATCAAT
Locus tag: PCC8801_3693
Name: SYNPCC7002_A2113
Funciton: Transglutaminase-like protein
SYNPCC7002_A2113
Transglutaminase-like protein

Position: -177
Score: 4
Sequence: TGTGATACTCATCATA
Locus tag: PCC8801_2042
Name: ppa
Funciton: inorganic pyrophosphatase
ppa
inorganic pyrophosphatase

Position: -239
Score: 3.8
Sequence: GGTGAAATTAGGCAAA
Locus tag: PCC8801_1079
Name: rlpA
Funciton: Predicted lipoprotein A
rlpA
Predicted lipoprotein A

Position: 5
Score: 3.9
Sequence: GATGTTTAAAGTCACC
Locus tag: PCC8801_2788
Name: apcC
Funciton: Phycobilisome linker polypeptide, allophycocyanin-associated
apcC
Phycobilisome linker polypeptide, allophycocyanin-associated

Position: -271
Score: 3.7
Sequence: AGTGACCTAAATTCCG
Locus tag: PCC8801_4329
Name: sigF
Funciton: RNA polymerase sigma-37
sigF
RNA polymerase sigma-37
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