Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of Crp in Cyanothece sp. ATCC 51142

Properties
Regulator type: Transcription factor
TF locus tag: cce_1423
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process:
Effector: Cyclic 3',5'-AMP
Regulog: Crp - Cyanobacteria
Statistics of regulated genes:
- Genes 23
- Operons 16
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 106 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -78
Score: 3.7
Sequence: TGTGATAAAAAAGCCA
Locus tag: cce_1977
Name: coxB
Funciton: Cytochrome c oxidase subunit 2 (EC 1.9.3.1)
Locus tag: cce_1976
Name: coxA
Funciton: Cytochrome c oxidase subunit 1 (EC 1.9.3.1)
Locus tag: cce_1975
Name: coxC
Funciton: Cytochrome c oxidase subunit 3 (EC 1.9.3.1)
coxB
Cytochrome c oxidase subunit 2 (EC 1.9.3.1)
coxA
Cytochrome c oxidase subunit 1 (EC 1.9.3.1)
coxC
Cytochrome c oxidase subunit 3 (EC 1.9.3.1)

Position: -221
Score: 4.2
Sequence: ACTGATAATAATCCCA
Position: -53
Score: 4.1
Sequence: CGTGAGTTAGATCAAC
Locus tag: cce_0568
Name: nifW
Funciton: Nitrogenase-stabilizing/protective protein
Locus tag: cce_0569
Name: hesA
Funciton: Nitrogen fixation related protein
Locus tag: cce_0570
Name: hesB
Funciton: Nitrogen fixation related protein
nifW
Nitrogenase-stabilizing/protective protein
hesA
Nitrogen fixation related protein
hesB
Nitrogen fixation related protein

Position: -95
Score: 3.9
Sequence: TGTTGTCAAAGTCACA
Locus tag: cce_0683
Name: sufR
Funciton: Iron-sulfur cluster biogenesis regulator, DeoR family
sufR
Iron-sulfur cluster biogenesis regulator, DeoR family

Position: -137
Score: 3.8
Sequence: TTTGACTTAAATAACC
Locus tag: cce_3288
Name: SYNPCC7002_A0687
Funciton: Conserved hypothetical protein
SYNPCC7002_A0687
Conserved hypothetical protein

Position: -170
Score: 4
Sequence: GTTGATAAAGTTCATA
Locus tag: cce_0927
Name: serS
Funciton: Seryl-tRNA synthetase (EC 6.1.1.11)
serS
Seryl-tRNA synthetase (EC 6.1.1.11)

Position: -138
Score: 4.6
Sequence: GGTGATTTAAGTCATC
Locus tag: cce_0244
Name: cce_0244
Funciton: Conserved hypothetical protein
cce_0244
Conserved hypothetical protein

Position: -123
Score: 4
Sequence: GGTGGTATAAATGACA
Locus tag: cce_0554
Name: nifB
Funciton: FeMo nitrogenase cofactor biosynthesis protein
Locus tag: cce_0555
Name: cce_0555
Funciton: Conserved hypothetical protein, putatuve subunit of nitrogenase
Locus tag: cce_0556
Name: cce_0556
Funciton: 4Fe-4S ferredoxin subunit of nitrogenase
Locus tag: cce_0557
Name: nifS
Funciton: Cysteine desulfurase (EC 2.8.1.7)
nifB
FeMo nitrogenase cofactor biosynthesis protein
cce_0555
Conserved hypothetical protein, putatuve subunit of nitrogenase
cce_0556
4Fe-4S ferredoxin subunit of nitrogenase
nifS
Cysteine desulfurase (EC 2.8.1.7)

Position: 12
Score: 4.2
Sequence: ACTGATAATAATCCCA
Locus tag: cce_0567
Name: nifK2
Funciton: Nitrogen fixation protein
nifK2
Nitrogen fixation protein

Position: -1
Score: 3.8
Sequence: GGTGAATTTAAGCATG
Locus tag: cce_2365
Name: sll1708
Funciton: Two component transcriptional regulator, LuxR family
sll1708
Two component transcriptional regulator, LuxR family

Position: -48
Score: 4.4
Sequence: TCTGACTGAAATCACA
Locus tag: cce_3647
Name: SYNPCC7002_A1600
Funciton: Conserved hypothetical protein
SYNPCC7002_A1600
Conserved hypothetical protein

Position: -83
Score: 5.1
Sequence: TGTGATCTTGATCACA
Locus tag: cce_4424
Name: murF
Funciton: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10)
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10)

Position: -23
Score: 3.6
Sequence: CATGATTTTATTCAGA
Locus tag: cce_0800
Name: ackA
Funciton: Acetate kinase (EC 2.7.2.1)
ackA
Acetate kinase (EC 2.7.2.1)

Position: -72
Score: 4.1
Sequence: TGTGAGTTTTGTCACG
Locus tag: cce_2512
Name: slr1503
Funciton: Predicted aldo/keto reductase
slr1503
Predicted aldo/keto reductase

Position: -265
Score: 4.5
Sequence: TGTGATTATTATCAAA
Position: -104
Score: 4.4
Sequence: TGTGATTATTATCAAC
Locus tag: cce_4329
Name: ppa
Funciton: inorganic pyrophosphatase
ppa
inorganic pyrophosphatase

Position: 5
Score: 4.1
Sequence: AATGTTTAAAGTCACC
Locus tag: cce_2911
Name: apcC
Funciton: Phycobilisome linker polypeptide, allophycocyanin-associated
apcC
Phycobilisome linker polypeptide, allophycocyanin-associated

Position: -215
Score: 4
Sequence: TGTTAACTAGATCACA
Locus tag: cce_3687
Name: rlpA
Funciton: Predicted lipoprotein A
rlpA
Predicted lipoprotein A
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