Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of TnrA in Oceanobacillus iheyensis HTE831

Properties
Regulator type: Transcription factor
TF locus tag: OB0950
Regulator family: MerR
Regulation mode: repressor (activator)
Biological process: Nitrogen assimilation
Effector: NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase
Regulog: TnrA - Bacillales
Statistics of regulated genes:
- Genes 27
- Operons 10
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 304 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -80
Score: 5.1
Sequence: TGTTAGAAATACTAACA
Position: -57
Score: 4.3
Sequence: TGACATATAAGCTGACG
Locus tag: OB1650
Name: glnR
Funciton: Transcriptional regulator of nitrogen excess response, MerR family
Locus tag: OB1651
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnR
Transcriptional regulator of nitrogen excess response, MerR family
glnA
Glutamine synthetase type I (EC 6.3.1.2)

Position: -678
Score: 4.6
Sequence: TGTTAAATAATGTAACG
Locus tag: OB0021
Name: gltT
Funciton: H(+)/sodium-glutamate symporter
gltT
H(+)/sodium-glutamate symporter

Position: -639
Score: 5.1
Sequence: TGTAAGGTTTTCTTACA
Position: -531
Score: 4.3
Sequence: ATTCATAAAATCTGACA
Locus tag: OB2623
Name: ilvB
Funciton: Acetolactate synthase large subunit (EC 2.2.1.6)
Locus tag: OB2622
Name: ilvH
Funciton: Acetolactate synthase small subunit (EC 2.2.1.6)
Locus tag: OB2621
Name: ilvC
Funciton: Ketol-acid reductoisomerase (EC 1.1.1.86)
Locus tag: OB2620
Name: leuA
Funciton: 2-isopropylmalate synthase (EC 2.3.3.13)
Locus tag: OB2619
Name: leuB
Funciton: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
Locus tag: OB2618
Name: leuC
Funciton: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Locus tag: OB2617
Name: leuD
Funciton: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
ilvB
Acetolactate synthase large subunit (EC 2.2.1.6)
ilvH
Acetolactate synthase small subunit (EC 2.2.1.6)
ilvC
Ketol-acid reductoisomerase (EC 1.1.1.86)
leuA
2-isopropylmalate synthase (EC 2.3.3.13)
leuB
3-isopropylmalate dehydrogenase (EC 1.1.1.85)
leuC
3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
leuD
3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)

Position: -469
Score: 4.3
Sequence: TGTAATATTTTATGAAG
Position: -325
Score: 3.9
Sequence: TGTTAATTTTTATCAAA
Locus tag: OB2615
Name: oppD
Funciton: Oligopeptide ABC transporter ATP-binding protein
Locus tag: OB2614
Name: oppF
Funciton: Oligopeptide ABC transporter ATP-binding protein
Locus tag: OB2613
Name: appB
Funciton: Oligopeptide ABC transporter (permease)
Locus tag: OB2612
Name: oppC
Funciton: Oligopeptide ABC transporter permease
Locus tag: OB2611
Name: oppA
Funciton: Oligopeptide ABC transporter substrate-binding protein
oppD
Oligopeptide ABC transporter ATP-binding protein
oppF
Oligopeptide ABC transporter ATP-binding protein
appB
Oligopeptide ABC transporter (permease)
oppC
Oligopeptide ABC transporter permease
oppA
Oligopeptide ABC transporter substrate-binding protein

Position: -146
Score: 4.4
Sequence: TGTCGAATTTTGTAACA
Locus tag: OB2264
Name: appD
Funciton: Oligopeptide ABC transporter (ATP-binding protein)
Locus tag: OB2263
Name: appF
Funciton: oligopeptide ABC transporter (ATP-binding protein)
Locus tag: OB2262
Name: appA
Funciton: Oligopeptide ABC transporter (substrate-binding)
Locus tag: OB2261
Name: appB
Funciton: Oligopeptide ABC transporter (permease)
Locus tag: OB2260
Name: appC
Funciton: Oligopeptide ABC transporter (permease)
appD
Oligopeptide ABC transporter (ATP-binding protein)
appF
oligopeptide ABC transporter (ATP-binding protein)
appA
Oligopeptide ABC transporter (substrate-binding)
appB
Oligopeptide ABC transporter (permease)
appC
Oligopeptide ABC transporter (permease)

Position: -98
Score: 4
Sequence: TTTACGATTATGTAACA
Locus tag: OB1740
Name: thyB
Funciton: Thymidylate synthase (EC 2.1.1.45)
Locus tag: OB1739
Name: dfrA
Funciton: Dihydrofolate reductase (EC 1.5.1.3)
thyB
Thymidylate synthase (EC 2.1.1.45)
dfrA
Dihydrofolate reductase (EC 1.5.1.3)

Position: -381
Score: 3.9
Sequence: TGTTATTTTATGTTCCT
Locus tag: OB3382
Name: ycsI
Funciton: Hypothetical protein
ycsI
Hypothetical protein

Position: -596
Score: 4.7
Sequence: TGTTATAATAATTAACA
Position: -253
Score: 4
Sequence: TCTAAGAAATTATAAAA
Locus tag: OB0268
Name: yycB
Funciton: Cyanate MFS transporter
yycB
Cyanate MFS transporter

Position: -37
Score: 3.6
Sequence: AGAAAGAATTACTATCA
Locus tag: OB2519
Name: degU
Funciton: Transcriptional regulator essential for degradative enzyme expression and competence regulation, OmpR family
degU
Transcriptional regulator essential for degradative enzyme expression and competence regulation, OmpR family

Position: -60
Score: 3.4
Sequence: TGATAATTTACATAACC
Position: -38
Score: 5.2
Sequence: TGTTAGGAAATCTAACA
Position: -31
Score: 3.7
Sequence: TTTTATAAATTATAAAG
Locus tag: OB1212
Name: nrgB2
Funciton: Nitrogen regulatory protein P-II
Locus tag: OB1211
Name: nrgA2
Funciton: Ammonium transporter
nrgB2
Nitrogen regulatory protein P-II
nrgA2
Ammonium transporter
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