Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of TnrA in Anoxybacillus flavithermus WK1

Properties
Regulator type: Transcription factor
TF locus tag: Aflv_1544
Regulator family: MerR
Regulation mode: repressor (activator)
Biological process: Nitrogen assimilation
Effector: NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase
Regulog: TnrA - Bacillales
Statistics of regulated genes:
- Genes 27
- Operons 10
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 304 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -82
Score: 4.7
Sequence: TGTGATAAAATGTAACG
Position: -59
Score: 4.3
Sequence: TGACATATAAGTTAACA
Locus tag: Aflv_1508
Name: glnR
Funciton: Transcriptional regulator of nitrogen excess response, MerR family
Locus tag: Aflv_1507
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnR
Transcriptional regulator of nitrogen excess response, MerR family
glnA
Glutamine synthetase type I (EC 6.3.1.2)

Position: 2
Score: 4
Sequence: GGTAAAAGTATATTACA
Locus tag: Aflv_0591
Name: ilvB
Funciton: Acetolactate synthase large subunit (EC 2.2.1.6)
Locus tag: Aflv_0592
Name: ilvH
Funciton: Acetolactate synthase small subunit (EC 2.2.1.6)
Locus tag: Aflv_0593
Name: ilvC
Funciton: Ketol-acid reductoisomerase (EC 1.1.1.86)
Locus tag: Aflv_0594
Name: leuA
Funciton: 2-isopropylmalate synthase (EC 2.3.3.13)
Locus tag: Aflv_0595
Name: leuB
Funciton: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
Locus tag: Aflv_0596
Name: leuC
Funciton: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Locus tag: Aflv_0597
Name: leuD
Funciton: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
ilvB
Acetolactate synthase large subunit (EC 2.2.1.6)
ilvH
Acetolactate synthase small subunit (EC 2.2.1.6)
ilvC
Ketol-acid reductoisomerase (EC 1.1.1.86)
leuA
2-isopropylmalate synthase (EC 2.3.3.13)
leuB
3-isopropylmalate dehydrogenase (EC 1.1.1.85)
leuC
3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
leuD
3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)

Position: -19
Score: 4.1
Sequence: TGTCATTTTATTTTAAA
Position: 1
Score: 4.3
Sequence: TGTTACAATGTTTAACA
Locus tag: Aflv_1238
Name: ilvD
Funciton: Dihydroxy-acid dehydratase (EC 4.2.1.9)
ilvD
Dihydroxy-acid dehydratase (EC 4.2.1.9)

Position: -112
Score: 4.6
Sequence: TGTCATGAAAAATAACA
Position: -49
Score: 4.8
Sequence: TGTAATATATTATAACC
Position: -27
Score: 5
Sequence: TGTTATAAAAAATGACA
Locus tag: Aflv_1332
Name: nrgA
Funciton: Ammonium transporter
Locus tag: Aflv_1333
Name: null
Funciton: Predicted nucleotidyltransferase DUF294 family
Locus tag: Aflv_1334
Name: dpo3
Funciton: DNA polymerase III, epsilon subunit
nrgA
Ammonium transporter
Predicted nucleotidyltransferase DUF294 family
dpo3
DNA polymerase III, epsilon subunit

Position: -33
Score: 4.4
Sequence: TGAAATATATTATTTCA
Locus tag: Aflv_0358
Name: gsiA
Funciton: Glutathione import ATP-binding protein
Locus tag: Aflv_0359
Name: gsiC
Funciton: Glutathione transport system permease
Locus tag: Aflv_0360
Name: gsiD
Funciton: Glutathione transport system permease
gsiA
Glutathione import ATP-binding protein
gsiC
Glutathione transport system permease
gsiD
Glutathione transport system permease

Position: -127
Score: 4
Sequence: TGTGAACAAACCTCACA
Position: -99
Score: 4.6
Sequence: TGTTAGAAAATTTAAAA
Locus tag: Aflv_2133
Name: dppE
Funciton: Oligopeptide ABC transporter (oligopeptide-binding protein)
Locus tag: Aflv_2132
Name: oppB
Funciton: Oligopeptide ABC transporter (permease)
Locus tag: Aflv_2131
Name: oppC
Funciton: Oligopeptide ABC transporter (permease)
Locus tag: Aflv_2130
Name: oppD
Funciton: Oligopeptide ABC transporter (ATP-binding protein)
Locus tag: Aflv_2129
Name: oppF
Funciton: Oligopeptide ABC transporter (ATP-binding protein)
dppE
Oligopeptide ABC transporter (oligopeptide-binding protein)
oppB
Oligopeptide ABC transporter (permease)
oppC
Oligopeptide ABC transporter (permease)
oppD
Oligopeptide ABC transporter (ATP-binding protein)
oppF
Oligopeptide ABC transporter (ATP-binding protein)

Position: -43
Score: 5
Sequence: TGTCATAATAAATGACA
Locus tag: Aflv_1455
Name: thyB
Funciton: Thymidylate synthase (EC 2.1.1.45)
Locus tag: Aflv_1454
Name: dfrA
Funciton: Dihydrofolate reductase (EC 1.5.1.3)
thyB
Thymidylate synthase (EC 2.1.1.45)
dfrA
Dihydrofolate reductase (EC 1.5.1.3)

Position: -113
Score: 4.9
Sequence: TGTTACTTTTTATAACA
Position: -82
Score: 4.9
Sequence: TGTTACTTTTTATAACA
Position: -27
Score: 5.4
Sequence: TGTTATAAAATATGACA
Locus tag: Aflv_1544
Name: tnrA
Funciton: Transcriptional regulator of nitrogen assimilation, MerR family
tnrA
Transcriptional regulator of nitrogen assimilation, MerR family

Position: -172
Score: 5.4
Sequence: TGTCATATTTTATAACA
Position: -117
Score: 4.9
Sequence: TGTTATAAAAAGTAACA
Position: -86
Score: 4.9
Sequence: TGTTATAAAAAGTAACA
Locus tag: Aflv_1545
Name: null
Funciton: Hypothetical protein
Locus tag: Aflv_1546
Name: ykzB
Funciton: Hypothetical protein
Hypothetical protein
ykzB
Hypothetical protein

Position: -16
Score: 4.9
Sequence: TGTGAGGTAATGTAACA
Locus tag: Aflv_1403
Name: glnA2
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnA2
Glutamine synthetase type I (EC 6.3.1.2)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD