Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of NtcB in Cyanothece sp. PCC 8801

Properties
Regulator type: Transcription factor
TF locus tag: PCC8801_2329
Regulator family: LysR
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Nitrite
Regulog: NtcB - Cyanobacteria
Statistics of regulated genes:
- Genes 9
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 44 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -235
Score: 4.5
Sequence: ATGCAAAAACCACAT
Position: -213
Score: 4
Sequence: ATGCTTTTATTGCAA
Locus tag: PCC8801_4396
Name: nrtA
Funciton: nitrate/nitrite ABC transport system, substrate-binding protein
Locus tag: PCC8801_4395
Name: nrtB
Funciton: nitrate/nitrite ABC transport system, permease protein
Locus tag: PCC8801_4394
Name: nrtC
Funciton: nitrate/nitrite ABC transport system, ATP-binding protein
Locus tag: PCC8801_4393
Name: nrtD
Funciton: nitrate/nitrite ABC transport system, ATP-binding protein
nrtA
nitrate/nitrite ABC transport system, substrate-binding protein
nrtB
nitrate/nitrite ABC transport system, permease protein
nrtC
nitrate/nitrite ABC transport system, ATP-binding protein
nrtD
nitrate/nitrite ABC transport system, ATP-binding protein

Position: -126
Score: 3.9
Sequence: ATGCAAAATAATCAT
Locus tag: PCC8801_2468
Name: nirA
Funciton: ferredoxin--nitrite reductase
Locus tag: PCC8801_2467
Name: nrtP
Funciton: nitrate/nitrite transporter
nirA
ferredoxin--nitrite reductase
nrtP
nitrate/nitrite transporter

Position: -30
Score: 4.3
Sequence: ATGCAATTTATTCAA
Locus tag: PCC8801_4145
Name: psbL
Funciton: photosystem II protein L
Locus tag: PCC8801_4144
Name: psbJ
Funciton: photosystem II protein J
psbL
photosystem II protein L
psbJ
photosystem II protein J

Position: -249
Score: 4.2
Sequence: ATGCGGAACCTGTAT
Locus tag: PCC8801_2861
Name: psbM
Funciton: photosystem II reaction centre M protein
psbM
photosystem II reaction centre M protein
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