Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of NtcA in Gloeobacter violaceus PCC 7421

Properties
Regulator type: Transcription factor
TF locus tag: gvip454
Regulator family: CRP
Regulation mode: activator
Biological process: Nitrogen assimilation
Effector: 2-oxoglutarate
Regulog: NtcA - Cyanobacteria
Statistics of regulated genes:
- Genes 6
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 228 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -116
Score: 4
Sequence: CGTATCTCAGACTACA
Locus tag: gvip146
Name: glnA
Funciton: glutamine synthetase, type I
glnA
glutamine synthetase, type I

Position: -146
Score: 4
Sequence: TGTATCTGGGGTTACG
Locus tag: gvip212
Name: nirA
Funciton: Nitrite reductase, ferredoxin dependent
nirA
Nitrite reductase, ferredoxin dependent

Position: -77
Score: 3.9
Sequence: AGTAGTCCCTAATACA
Locus tag: gvip454
Name: ntcA
Funciton: Global nitrogen transcription regulator, Crp family
ntcA
Global nitrogen transcription regulator, Crp family

Position: -46
Score: 4
Sequence: CGTAACCCCAGATACA
Locus tag: gvip213
Name: ntcB
Funciton: Nitrogen assimilation transcriptional activator, LysR family
ntcB
Nitrogen assimilation transcriptional activator, LysR family

Position: -116
Score: 3.9
Sequence: TGTAACAAATTGTAGA
Locus tag: glr3304
Name: fur
Funciton: Ferric uptake regulator, Fur family
fur
Ferric uptake regulator, Fur family

Position: -379
Score: 3.6
Sequence: TGTATCTAGAACTAGC
Locus tag: gll0880
Name: trxA
Funciton: Thioredoxin-1
trxA
Thioredoxin-1
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