Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of NtcA in Microcystis aeruginosa NIES-843

Properties
Regulator type: Transcription factor
TF locus tag: MAE_01830
Regulator family: CRP
Regulation mode: activator
Biological process: Nitrogen assimilation
Effector: 2-oxoglutarate
Regulog: NtcA - Cyanobacteria
Statistics of regulated genes:
- Genes 29
- Operons 20
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 228 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -170
Score: 4.7
Sequence: AGTAGCAAAAATTACA
Position: -140
Score: 4.6
Sequence: AGTAGCGAAAGTTACA
Locus tag: MAE_06220
Name: urtA
Funciton: Urea ABC transporter, substrate-binding protein
Locus tag: MAE_06210
Name: urtB
Funciton: Urea ABC transporter, permease protein 1
Locus tag: MAE_06200
Name: urtC
Funciton: Urea ABC transporter, permease protein 2
Locus tag: MAE_06190
Name: urtD
Funciton: Urea ABC transporter, ATP-binding protein 1
urtA
Urea ABC transporter, substrate-binding protein
urtB
Urea ABC transporter, permease protein 1
urtC
Urea ABC transporter, permease protein 2
urtD
Urea ABC transporter, ATP-binding protein 1

Position: -30
Score: 3.7
Sequence: CGTATAGATAAATACT
Locus tag: MAE_62530
Name: icd
Funciton: Isocitrate dehydrogenase (NADP+)
icd
Isocitrate dehydrogenase (NADP+)

Position: -213
Score: 4.6
Sequence: TGTATCAACGAATACA
Locus tag: MAE_40010
Name: amt1
Funciton: ammonium transporter
amt1
ammonium transporter

Position: -99
Score: 4.3
Sequence: TGTAATCGTCGATACA
Locus tag: MAE_39690
Name: SYNPCC7002_A0076
Funciton: hypothetical protein
SYNPCC7002_A0076
hypothetical protein

Position: -87
Score: 4.2
Sequence: TGTAATCATCTTTACA
Locus tag: MAE_38700
Name: SYNPCC7002_A2395
Funciton: hypothetical protein
SYNPCC7002_A2395
hypothetical protein

Position: -75
Score: 3.7
Sequence: TGTAAACTGGGAAACA
Locus tag: MAE_14410
Name: SYNPCC7002_A1954
Funciton: putative two-component sensor histidine kinase
SYNPCC7002_A1954
putative two-component sensor histidine kinase

Position: -38
Score: 4.9
Sequence: TGTAAATTTAGATACA
Locus tag: MAE_14840
Name: cce_3797
Funciton: conserved hypothetical protein
cce_3797
conserved hypothetical protein

Position: -42
Score: 4.9
Sequence: TGTAAaAataGATACA
Locus tag: MAE_49490
Name: gifA
Funciton: glutamine synthetase inactivating factor IF
gifA
glutamine synthetase inactivating factor IF

Position: -92
Score: 4.7
Sequence: TGTATCgaAaaATACA
Locus tag: MAE_19270
Name: glnA
Funciton: glutamine synthetase, type I
glnA
glutamine synthetase, type I

Position: -244
Score: 4.7
Sequence: TGTAAtgTtTGATACA
Locus tag: MAE_09050
Name: glnN
Funciton: glutamine synthetase type III
glnN
glutamine synthetase type III

Position: -190
Score: 4.1
Sequence: TGTTACAGACAATACA
Locus tag: MAE_18410
Name: nirA
Funciton: Nitrite reductase, ferredoxin dependent
nirA
Nitrite reductase, ferredoxin dependent

Position: -177
Score: 4.2
Sequence: TGTAACAATCTATACG
Locus tag: MAE_14810
Name: MAE_14810
Funciton: Hypothetical protein
Locus tag: MAE_14800
Name: nrtA
Funciton: Nitrate/nitrite ABC transporter, substrate-binding protein
Locus tag: MAE_14790
Name: nrtB
Funciton: Nitrate/nitrite ABC transporter, permease protein
Locus tag: MAE_14780
Name: nrtC
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 1
Locus tag: MAE_14770
Name: nrtD
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 2
MAE_14810
Hypothetical protein
nrtA
Nitrate/nitrite ABC transporter, substrate-binding protein
nrtB
Nitrate/nitrite ABC transporter, permease protein
nrtC
Nitrate/nitrite ABC transporter, ATP-binding protein 1
nrtD
Nitrate/nitrite ABC transporter, ATP-binding protein 2

Position: -88
Score: 4.8
Sequence: TGTATTAATAACTACA
Locus tag: MAE_53960
Name: narB
Funciton: Nitrate reductase
narB
Nitrate reductase

Position: -80
Score: 4.1
Sequence: gGTAgCAatTtcTACc
Locus tag: MAE_09380
Name: ntcB
Funciton: Nitrogen assimilation transcriptional activator, LysR family
ntcB
Nitrogen assimilation transcriptional activator, LysR family

Position: -38
Score: 4.9
Sequence: TGTAAATTTAGATACA
Locus tag: MAE_14840
Name: SYNPCC7002_A2101
Funciton: Conserved hypothetical protein
SYNPCC7002_A2101
Conserved hypothetical protein

Position: -126
Score: 4.9
Sequence: TGTAATTAAAGCTACA
Locus tag: MAE_54470
Name: rpoD
Funciton: RNA polymerase sigma 70 factor
rpoD
RNA polymerase sigma 70 factor

Position: -68
Score: 4.8
Sequence: TGTATCTTTAGCTACT
Locus tag: MAE_18580
Name: SYNPCC7002_A0264
Funciton: Conserved hypothetical protein
SYNPCC7002_A0264
Conserved hypothetical protein

Position: -141
Score: 3.8
Sequence: AGTTATTTTAAATACT
Locus tag: MAE_22930
Name: coxB
Funciton: Cytochrome c oxidase subunit 2 (EC 1.9.3.1)
Locus tag: MAE_22940
Name: coxA
Funciton: Cytochrome c oxidase subunit 1 (EC 1.9.3.1)
Locus tag: MAE_22950
Name: coxC
Funciton: Cytochrome c oxidase subunit 3 (EC 1.9.3.1)
coxB
Cytochrome c oxidase subunit 2 (EC 1.9.3.1)
coxA
Cytochrome c oxidase subunit 1 (EC 1.9.3.1)
coxC
Cytochrome c oxidase subunit 3 (EC 1.9.3.1)

Position: -118
Score: 3.7
Sequence: AGTAATTTTTCATACT
Locus tag: MAE_37080
Name: fur
Funciton: Ferric uptake regulator, Fur family
fur
Ferric uptake regulator, Fur family

Position: -8
Score: 3.8
Sequence: GGTTGACAATGTTACA
Locus tag: MAE_06180
Name: urtE
Funciton: Urea ABC transporter, ATP-binding protein 2
urtE
Urea ABC transporter, ATP-binding protein 2
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