Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of IscR in Yersinia pestis KIM

Properties
Regulator type: Transcription factor
TF locus tag: y1333
Regulator family: Rrf2
Regulation mode: activator (repressor)
Biological process: Iron-sulfur cluster biogenesis
Effector: Iron-sulfur cluster redox state
Regulog: IscR - Enterobacteriales
Statistics of regulated genes:
- Genes 11
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 45 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -37
Score: 6.3
Sequence: ATAACCGACAAGAGTAGTCAACTAT
Locus tag: y3903
Name: nfuA
Funciton: NfuA Fe-S protein maturation
nfuA
NfuA Fe-S protein maturation

Position: -103
Score: 6
Sequence: GTACTTGAATGAAATACTCAGGTAT
Locus tag: y0801
Name: erpA
Funciton: ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family
erpA
ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family

Position: -29
Score: 5.3
Sequence: ATAGTTGAGTGAATTACTAGGTTAA
Position: -4
Score: 6.6
Sequence: ATAGTTGACTAAAACACTCAAGAAT
Locus tag: y1333
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: y1334
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: y1335
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: y1336
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: y1337
Name: null
Funciton: hypothetical
Locus tag: y1338
Name: hscB
Funciton: co-chaperone protein HscB
Locus tag: y1339
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: y1340
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
Locus tag: y1341
Name: yfhJ
Funciton: putative Fe-S cluster assembly protein
iscR
Iron-sulfur cluster regulator IscR
iscS
Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
iscU
Iron-sulfur cluster assembly scaffold protein IscU
iscA
Iron binding protein IscA for iron-sulfur cluster assembly
hypothetical
hscB
co-chaperone protein HscB
hscA
Chaperone protein HscA
fdx
ferredoxin, 2Fe-2S type, ISC system
yfhJ
putative Fe-S cluster assembly protein
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Regulated Genes [ Tab delimited format ] DOWNLOAD
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