Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Zur - Desulfovibrionales

Properties
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Proteobacteria/delta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 6 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Desulfovibrio vulgaris Hildenborough 4 1
Desulfovibrio vulgaris str. Miyazaki F 3 1
Desulfovibrio desulfuricans G20 4 1
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Desulfovibrio piger ATCC 29098
Desulfovibrio salexigens DSM 2638 2 1
Desulfovibrio magneticus RS-1 1 1
Lawsonia intracellularis PHE/MN1-00
Desulfomicrobium baculatum DSM 4028 2 1
Desulfohalobium retbaense DSM 5692
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
znuA
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -217
score = 6.54067
sequence = ATGCAACAGTGTTGCAT

Gene: DVU1343: Zinc ABC transporter, periplasmic-binding protein ZnuA
*
Desulfovibrio vulgaris str. Miyazaki F

Site:
position = -56
score = 6.54067
sequence = ATGCAACAGAGTTGCAT

Gene: DvMF_0119: Zinc ABC transporter, periplasmic-binding protein ZnuA
*
Desulfovibrio desulfuricans G20

Site:
position = -48
score = 6.46572
sequence = ATGCAACTGAGTTGCAT

Gene: Dde_2208: Zinc ABC transporter, periplasmic-binding protein ZnuA
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_3439: Zinc ABC transporter, periplasmic-binding protein ZnuA
*
Desulfovibrio magneticus RS-1

Site:
position = 0
score = 6.27401
sequence = ATGCAACTTTGTTGCAT

Gene: DMR_26850: Zinc ABC transporter, periplasmic-binding protein ZnuA
 
Lawsonia intracellularis PHE/MN1-00
*
Desulfomicrobium baculatum DSM 4028

Site:
position = -46
score = 5.91024
sequence = ATGCAATCCTGTTGCAT

Gene: Dbac_0624: Zinc ABC transporter, periplasmic-binding protein ZnuA
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0025: Zinc ABC transporter, periplasmic-binding protein ZnuA
Zinc ABC transporter, periplasmic-binding protein ZnuA
znuC
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU1342: Zinc ABC transporter, ATP-binding protein ZnuC
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_0118: Zinc ABC transporter, ATP-binding protein ZnuC
 
Desulfovibrio desulfuricans G20

Gene: Dde_2209: Zinc ABC transporter, ATP-binding protein ZnuC
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
*
Desulfovibrio salexigens DSM 2638

Site:
position = -220
score = 5.5202
sequence = ATGAATAAAAGTTGCAT

Gene: Desal_1080: Zinc ABC transporter, ATP-binding protein ZnuC
 
Desulfovibrio magneticus RS-1

Gene: DMR_26830: Zinc ABC transporter, ATP-binding protein ZnuC
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_0623: Zinc ABC transporter, ATP-binding protein ZnuC
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0026: Zinc ABC transporter, ATP-binding protein ZnuC
Zinc ABC transporter, ATP-binding protein ZnuC
znuB
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU1341: Zinc ABC transporter, inner membrane permease protein ZnuB
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_0117: Zinc ABC transporter, inner membrane permease protein ZnuB
 
Desulfovibrio desulfuricans G20

Gene: Dde_2210: Zinc ABC transporter, inner membrane permease protein ZnuB
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_1081: Zinc ABC transporter, inner membrane permease protein ZnuB
 
Desulfovibrio magneticus RS-1

Gene: DMR_26820: Zinc ABC transporter, inner membrane permease protein ZnuB
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0027: Zinc ABC transporter, inner membrane permease protein ZnuB
Zinc ABC transporter, inner membrane permease protein ZnuB
zur
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU1340: Zinc uptake regulation protein Zur
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_0116: Zinc uptake regulation protein Zur
 
Desulfovibrio desulfuricans G20

Gene: Dde_2211: Zinc uptake regulation protein Zur
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0460: Zinc uptake regulation protein Zur
 
Desulfovibrio magneticus RS-1

Gene: DMR_26810: Zinc uptake regulation protein Zur
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_0621: Zinc uptake regulation protein Zur
 
Desulfohalobium retbaense DSM 5692
Zinc uptake regulation protein Zur
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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