Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog LldR - Desulfovibrionales

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Lactate utilization
Effector: L-lactate
Phylum: Proteobacteria/delta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 11 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Desulfovibrio vulgaris Hildenborough 3 1
Desulfovibrio vulgaris str. Miyazaki F 2 1
Desulfovibrio desulfuricans G20 2 1
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Desulfovibrio piger ATCC 29098
Desulfovibrio salexigens DSM 2638 3 1
Desulfovibrio magneticus RS-1
Lawsonia intracellularis PHE/MN1-00
Desulfomicrobium baculatum DSM 4028 4 3
Desulfohalobium retbaense DSM 5692 3 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
lldR
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -65
score = 5.90913
sequence = GATTGGTACAACCAATT

Site:
position = -49
score = 5.77421
sequence = TATTGGTTGGACCAATC

Gene: DVU2785: Lactate-responsive regulator LldR, GntR family
*
Desulfovibrio vulgaris str. Miyazaki F

Site:
position = -77
score = 4.96385
sequence = AATTGGTTCAACCAGTG

Site:
position = -61
score = 5.55422
sequence = GAGTGGTTGTACCAATT

Gene: DvMF_1205: Lactate-responsive regulator LldR, GntR family
*2
Desulfovibrio desulfuricans G20

Gene: Dde_0749: Lactate-responsive regulator LldR, GntR family

Site:
position = -31
score = 5.76891
sequence = AAGTGGTCAGACCAATT

Gene: Dde_1244: Lactate-responsive regulator LldR, GntR family
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
*
Desulfovibrio salexigens DSM 2638

Site:
position = -47
score = 5.47025
sequence = TATCGGTCAGACCAATT

Site:
position = -17
score = 5.81006
sequence = AATTGGTAGGACCCATT

Gene: Desal_1467: Lactate-responsive regulator LldR, GntR family
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
*
Desulfomicrobium baculatum DSM 4028

Site:
position = -32
score = 6.05008
sequence = TATTGGTAGGACCAATT

Gene: Dbac_1975: Lactate-responsive regulator LldR, GntR family
*
Desulfohalobium retbaense DSM 5692

Site:
position = -35
score = 5.89624
sequence = CATTGGTAGGACCAATT

Gene: Dret_0156: Lactate-responsive regulator LldR, GntR family
Lactate-responsive regulator LldR, GntR family
lldX
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2783: predicted lactate permease, DUF81 family
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1203: predicted lactate permease, DUF81 family
 2
Desulfovibrio desulfuricans G20

Gene: Dde_0751: predicted lactate permease, DUF81 family

Gene: Dde_1245: predicted lactate permease, DUF81 family
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_1872: predicted lactate permease, DUF81 family
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_00304: predicted lactate permease, DUF81 family
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_1466: predicted lactate permease, DUF81 family
 
Desulfovibrio magneticus RS-1

Gene: DMR_18860: predicted lactate permease, DUF81 family
 
Lawsonia intracellularis PHE/MN1-00
*
Desulfomicrobium baculatum DSM 4028

Site:
position = -70
score = 6.09688
sequence = GATTGGTCCTACCAATT

Gene: Dbac_0552: predicted lactate permease, DUF81 family
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0158: predicted lactate permease, DUF81 family
predicted lactate permease, DUF81 family
lldD
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2784: L-lactate dehydrogenase, FMN-dependent
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1204: L-lactate dehydrogenase, FMN-dependent
 
Desulfovibrio desulfuricans G20

Gene: Dde_0750: L-lactate dehydrogenase, FMN-dependent
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02967: L-lactate dehydrogenase, FMN-dependent
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_1465: L-lactate dehydrogenase, FMN-dependent
 
Desulfovibrio magneticus RS-1

Gene: DMR_21260: L-lactate dehydrogenase, FMN-dependent
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_1976: L-lactate dehydrogenase, FMN-dependent
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0157: L-lactate dehydrogenase, FMN-dependent
L-lactate dehydrogenase, FMN-dependent
 
CRON 2.
glcB
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU0701: Malate synthase G (EC 2.3.3.9)
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_2183: Malate synthase G (EC 2.3.3.9)
 
Desulfovibrio desulfuricans G20

Gene: Dde_1174: Malate synthase G (EC 2.3.3.9)
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio magneticus RS-1

Gene: DMR_26930: Malate synthase G (EC 2.3.3.9)
 
Lawsonia intracellularis PHE/MN1-00
*
Desulfomicrobium baculatum DSM 4028

Site:
position = -42
score = 6.05008
sequence = TATTGGTAGGACCAATT

Gene: Dbac_2068: Malate synthase G (EC 2.3.3.9)
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0331: Malate synthase G (EC 2.3.3.9)
Malate synthase G (EC 2.3.3.9)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD