Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog DVU2802 - Desulfovibrionales

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/delta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Desulfovibrio vulgaris Hildenborough 7 1
Desulfovibrio vulgaris str. Miyazaki F
Desulfovibrio desulfuricans G20 4 1
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 5 1
Desulfovibrio piger ATCC 29098
Desulfovibrio salexigens DSM 2638 8 1
Desulfovibrio magneticus RS-1
Lawsonia intracellularis PHE/MN1-00
Desulfomicrobium baculatum DSM 4028 5 1
Desulfohalobium retbaense DSM 5692 8 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
DVU2802
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -16
score = 6.19007
sequence = ATCTGGTTGGGCCAGAA

Gene: DVU2802: Transcriptional regulator, GntR family
 
Desulfovibrio vulgaris str. Miyazaki F
*
Desulfovibrio desulfuricans G20

Site:
position = -17
score = 5.54506
sequence = AATTGGTGGGACCAGAG

Gene: Dde_1614: Transcriptional regulator, GntR family
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Site:
position = -142
score = 5.47196
sequence = CTTTGGTATGACCAGAA

Gene: Ddes_1719: Transcriptional regulator, GntR family
 
Desulfovibrio piger ATCC 29098
*
Desulfovibrio salexigens DSM 2638

Site:
position = -286
score = 4.78421
sequence = ATCTGGTCCAACCAGAC

Site:
position = -122
score = 5.29291
sequence = ATCTGGTTGGACCAGTT

Site:
position = -17
score = 5.82809
sequence = AACTGGTTGGACCAGAT

Gene: Desal_0359: Transcriptional regulator, GntR family
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
*
Desulfomicrobium baculatum DSM 4028

Site:
position = -140
score = 5.1173
sequence = TTTTGGTTCTACCAAAA

Gene: Dbac_3146: Transcriptional regulator, GntR family
*
Desulfohalobium retbaense DSM 5692

Site:
position = -108
score = 4.92842
sequence = AATTGGTCTATCCAAAA

Gene: Dret_0921: Transcriptional regulator, GntR family
Transcriptional regulator, GntR family
Dvul_0511
 
Desulfovibrio vulgaris Hildenborough
 
Desulfovibrio vulgaris str. Miyazaki F
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0358: hypothetical protein
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
 
Desulfohalobium retbaense DSM 5692
hypothetical protein
DVU2803
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2803: membrane protein, putative
 
Desulfovibrio vulgaris str. Miyazaki F
 
Desulfovibrio desulfuricans G20

Gene: Dde_1615: membrane protein, putative
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_1721: membrane protein, putative
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0357: membrane protein, putative
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_3148: membrane protein, putative
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0919: membrane protein, putative
membrane protein, putative
DVU2804
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2804: Metal-dependent hydrolases of the beta-lactamase superfamily II
 
Desulfovibrio vulgaris str. Miyazaki F
 
Desulfovibrio desulfuricans G20

Gene: Dde_1616: Metal-dependent hydrolases of the beta-lactamase superfamily II
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_1722: Metal-dependent hydrolases of the beta-lactamase superfamily II
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0356: Metal-dependent hydrolases of the beta-lactamase superfamily II
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_3149: Metal-dependent hydrolases of the beta-lactamase superfamily II
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0918: Metal-dependent hydrolases of the beta-lactamase superfamily II
Metal-dependent hydrolases of the beta-lactamase superfamily II
DVU2805
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2805: cobalamin synthesis protein/P47K family
 
Desulfovibrio vulgaris str. Miyazaki F
 
Desulfovibrio desulfuricans G20

Gene: Dde_1617: cobalamin synthesis protein/P47K family
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_1723: cobalamin synthesis protein/P47K family
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0355: cobalamin synthesis protein/P47K family
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_3150: cobalamin synthesis protein/P47K family
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0917: cobalamin synthesis protein/P47K family
cobalamin synthesis protein/P47K family
DVU2806
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2806: MotA/TolQ/ExbB proton channel family protein
 
Desulfovibrio vulgaris str. Miyazaki F
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0354: MotA/TolQ/ExbB proton channel family protein
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0916: MotA/TolQ/ExbB proton channel family protein
MotA/TolQ/ExbB proton channel family protein
DVU2807
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2807: biopolymer transport protein, ExbD/TolR family
 
Desulfovibrio vulgaris str. Miyazaki F
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0353: biopolymer transport protein, ExbD/TolR family
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0915: biopolymer transport protein, ExbD/TolR family
biopolymer transport protein, ExbD/TolR family
DVU2808
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2808: TonB domain protein
 
Desulfovibrio vulgaris str. Miyazaki F
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_0352: TonB domain protein
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0914: TonB domain protein
TonB domain protein
Dbac_3147
 
Desulfovibrio vulgaris Hildenborough
 
Desulfovibrio vulgaris str. Miyazaki F
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_3147: hypothetical protein
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_0920: hypothetical protein
hypothetical protein
Ddes_1720
 
Desulfovibrio vulgaris Hildenborough
 
Desulfovibrio vulgaris str. Miyazaki F
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_1720: hypothetical protein
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
 
Desulfohalobium retbaense DSM 5692
hypothetical protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD