Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog DVU0379 - Desulfovibrionales

Properties
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode:
Biological process: Uranium reduction
Effector:
Phylum: Proteobacteria/delta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 3 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Desulfovibrio vulgaris Hildenborough 8 1
Desulfovibrio vulgaris str. Miyazaki F
Desulfovibrio desulfuricans G20 7 1
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Desulfovibrio piger ATCC 29098
Desulfovibrio salexigens DSM 2638 6 1
Desulfovibrio magneticus RS-1
Lawsonia intracellularis PHE/MN1-00
Desulfomicrobium baculatum DSM 4028
Desulfohalobium retbaense DSM 5692
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nhaC-1
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -163
score = 6.15419
sequence = CTGTTGCGGGTGCAACCG

Gene: DVU0381: Na+/H+ antiporter NhaC
 
Desulfovibrio vulgaris str. Miyazaki F
*
Desulfovibrio desulfuricans G20

Site:
position = -258
score = 6.15419
sequence = CTGTAGCAAATGCTACGG

Gene: Dde_0461: Na+/H+ antiporter NhaC
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
*
Desulfovibrio salexigens DSM 2638

Site:
position = -154
score = 6.28924
sequence = ATGTTGCATTTGCAACGG

Gene: Desal_1359: Na+/H+ antiporter NhaC
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
 
Desulfohalobium retbaense DSM 5692
Na+/H+ antiporter NhaC
DVU0380
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU0380: sulfatase, putative
 
Desulfovibrio vulgaris str. Miyazaki F
 
Desulfovibrio desulfuricans G20

Gene: Dde_0462: sulfatase, putative
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_1360: sulfatase, putative
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
 
Desulfohalobium retbaense DSM 5692
sulfatase, putative
DVU0379
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU0379: transcriptional regulator, Crp/Fnr family
 
Desulfovibrio vulgaris str. Miyazaki F
 
Desulfovibrio desulfuricans G20

Gene: Dde_0463: transcriptional regulator, Crp/Fnr family
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_1361: transcriptional regulator, Crp/Fnr family
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
 
Desulfohalobium retbaense DSM 5692
transcriptional regulator, Crp/Fnr family
DVU0378
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU0378: Thioredoxin domain protein
 
Desulfovibrio vulgaris str. Miyazaki F
 
Desulfovibrio desulfuricans G20

Gene: Dde_0464: Thioredoxin domain protein
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_1362: Thioredoxin domain protein
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
 
Desulfohalobium retbaense DSM 5692
Thioredoxin domain protein
trxB
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU0377: Thioredoxin reductase (EC 1.8.1.9)
 
Desulfovibrio vulgaris str. Miyazaki F
 
Desulfovibrio desulfuricans G20

Gene: Dde_0465: Thioredoxin reductase (EC 1.8.1.9)
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_1363: Thioredoxin reductase (EC 1.8.1.9)
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
 
Desulfohalobium retbaense DSM 5692
Thioredoxin reductase (EC 1.8.1.9)
DVU0376
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU0376: hypothetical protein
 
Desulfovibrio vulgaris str. Miyazaki F
 
Desulfovibrio desulfuricans G20

Gene: Dde_0466: hypothetical protein
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_1364: hypothetical protein
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
 
Desulfohalobium retbaense DSM 5692
hypothetical protein
DVU0375
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU0375: Glu/Leu/Phe/Val dehydrogenase family protein
 
Desulfovibrio vulgaris str. Miyazaki F
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
 
Desulfohalobium retbaense DSM 5692
Glu/Leu/Phe/Val dehydrogenase family protein
DVU0374
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU0374: Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8) / Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8)
 
Desulfovibrio vulgaris str. Miyazaki F
 
Desulfovibrio desulfuricans G20

Gene: Dde_0467: Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8) / Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8)
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio magneticus RS-1
 
Lawsonia intracellularis PHE/MN1-00
 
Desulfomicrobium baculatum DSM 4028
 
Desulfohalobium retbaense DSM 5692
Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8) / Indolepyruvate oxidoreductase subunit IorB (EC 1.2.7.8)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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