Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog ExuR - Bacillales

Properties
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Glucuronate utilization; Galacturonate utilization
Effector: Glucuronate; Galacturonate
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 5 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacillus subtilis subsp. subtilis str. 168 10 1
Bacillus amyloliquefaciens FZB42 5 1
Bacillus pumilus SAFR-032 4 1
Bacillus licheniformis DSM 13 5 1
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426
Bacillus cereus ATCC 14579
Bacillus halodurans C-125
Bacillus clausii KSM-K16
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
uxaC
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -45
score = 6.50826
sequence = ATGTTAACGTTAACAT

Gene: BSU12300: Uronate isomerase (EC 5.3.1.12)
*
Bacillus amyloliquefaciens FZB42

Site:
position = -38
score = 6.50826
sequence = TTGTTAACGTTAACAT

Gene: RBAM_012380: Uronate isomerase (EC 5.3.1.12)
*
Bacillus pumilus SAFR-032

Site:
position = -52
score = 6.18193
sequence = TTGTTAACGTGAACAA

Gene: BPUM_2987: Uronate isomerase (EC 5.3.1.12)
*
Bacillus licheniformis DSM 13

Site:
position = -43
score = 6.50826
sequence = TTGTTAACGTTAACAT

Site:
position = -75
score = 5.91759
sequence = ATGTTAACGTTCACAT

Gene: BLi03516: Uronate isomerase (EC 5.3.1.12)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH0705: Uronate isomerase (EC 5.3.1.12)
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831

Gene: OB0367: Uronate isomerase (EC 5.3.1.12)
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_2923: Uronate isomerase (EC 5.3.1.12)
Uronate isomerase (EC 5.3.1.12)
exuM
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU12310: Putative Na+:altronate/mannonate symporter
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_012390: Putative Na+:altronate/mannonate symporter
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi03515: Putative Na+:altronate/mannonate symporter
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Putative Na+:altronate/mannonate symporter
yjmC
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU12320: Ureidoglycolate dehydrogenase
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16

Gene: ABC4048: Ureidoglycolate dehydrogenase
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Ureidoglycolate dehydrogenase
yjmD
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU12330: Predicted mannuronate reductase (EC 1.1.1.131)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_017960: Predicted mannuronate reductase (EC 1.1.1.131)
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi01358: Predicted mannuronate reductase (EC 1.1.1.131)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16

Gene: ABC0630: Predicted mannuronate reductase (EC 1.1.1.131)
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Predicted mannuronate reductase (EC 1.1.1.131)
uxuA
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU12340: Mannonate dehydratase (EC 4.2.1.8)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_017980: Mannonate dehydratase (EC 4.2.1.8)
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi01356: Mannonate dehydratase (EC 4.2.1.8)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH1063: Mannonate dehydratase (EC 4.2.1.8)
 
Bacillus clausii KSM-K16

Gene: ABC0631: Mannonate dehydratase (EC 4.2.1.8)
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_0333: Mannonate dehydratase (EC 4.2.1.8)
Mannonate dehydratase (EC 4.2.1.8)
uxuB
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU12350: D-mannonate oxidoreductase (EC 1.1.1.57)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_017990: D-mannonate oxidoreductase (EC 1.1.1.57)
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi01357: D-mannonate oxidoreductase (EC 1.1.1.57)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH1067: D-mannonate oxidoreductase (EC 1.1.1.57)
 
Bacillus clausii KSM-K16

Gene: ABC0632: D-mannonate oxidoreductase (EC 1.1.1.57)
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_0334: D-mannonate oxidoreductase (EC 1.1.1.57)
D-mannonate oxidoreductase (EC 1.1.1.57)
exuT
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU12360: Hexuronate transporter
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_018010: Hexuronate transporter
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13

Gene: BLi01359: Hexuronate transporter
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Hexuronate transporter
exuR
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU12370: Transcriptional regulator of hexuronate utilization, LacI family
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_012400: Transcriptional regulator of hexuronate utilization, LacI family
 
Bacillus pumilus SAFR-032

Gene: BPUM_2986: Transcriptional regulator of hexuronate utilization, LacI family
 
Bacillus licheniformis DSM 13

Gene: BLi03514: Transcriptional regulator of hexuronate utilization, LacI family
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Transcriptional regulator of hexuronate utilization, LacI family
uxaB
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU12380: Altronate oxidoreductase (EC 1.1.1.58)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_012410: Altronate oxidoreductase (EC 1.1.1.58)
 
Bacillus pumilus SAFR-032

Gene: BPUM_2985: Altronate oxidoreductase (EC 1.1.1.58)
 
Bacillus licheniformis DSM 13

Gene: BLi03513: Altronate oxidoreductase (EC 1.1.1.58)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_2924: Altronate oxidoreductase (EC 1.1.1.58)
Altronate oxidoreductase (EC 1.1.1.58)
uxaA
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU12390: Altronate hydrolase (EC 4.2.1.7)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_012420: Altronate hydrolase (EC 4.2.1.7)
 
Bacillus pumilus SAFR-032

Gene: BPUM_2984: Altronate hydrolase (EC 4.2.1.7)
 
Bacillus licheniformis DSM 13

Gene: BLi03512: Altronate hydrolase (EC 4.2.1.7)
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
 
Bacillus cereus ATCC 14579
 
Bacillus halodurans C-125

Gene: BH0490: Altronate hydrolase (EC 4.2.1.7)
 2
Bacillus clausii KSM-K16

Gene: ABC0442: Altronate hydrolase (EC 4.2.1.7)

Gene: ABC1153: Altronate hydrolase (EC 4.2.1.7)
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_2925: Altronate hydrolase (EC 4.2.1.7)
Altronate hydrolase (EC 4.2.1.7)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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