Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog BgrT1 - Bifidobacteriaceae

Properties
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode:
Biological process: Beta-glucosides utilization
Effector:
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 10 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bifidobacterium adolescentis ATCC 15703 2 2
Bifidobacterium angulatum DSM 20098 2 2
Bifidobacterium animalis subsp. lactis AD011
Bifidobacterium bifidum NCIMB 41171
Bifidobacterium breve DSM 20213 2 2
Bifidobacterium dentium Bd1 2 2
Bifidobacterium gallicum DSM 20093
Bifidobacterium longum NCC2705
Bifidobacterium longum subsp. infantis ATCC 15697 2 2
Gardnerella vaginalis 409-05
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
bgrT1
*
Bifidobacterium adolescentis ATCC 15703

Site:
position = -141
score = 6.04119
sequence = ACTAACCGGTCGGTAGGT

Gene: BAD_1195: Predicted beta-glucoside specific transcriptional regulator, TetR family
*
Bifidobacterium angulatum DSM 20098

Site:
position = -140
score = 6.45257
sequence = ACCAACCGATTGGTAGGT

Gene: BIFANG_00895: Predicted beta-glucoside specific transcriptional regulator, TetR family
 
Bifidobacterium animalis subsp. lactis AD011
 
Bifidobacterium bifidum NCIMB 41171
*
Bifidobacterium breve DSM 20213

Site:
position = -92
score = 6.26745
sequence = ACCAACCGGTTGGTAGGT

Gene: BIFBRE_00467: Predicted beta-glucoside specific transcriptional regulator, TetR family
*
Bifidobacterium dentium Bd1

Site:
position = -141
score = 6.45257
sequence = ACCAACCGATTGGTAGGT

Gene: BDP_1658: Predicted beta-glucoside specific transcriptional regulator, TetR family
 
Bifidobacterium gallicum DSM 20093
 
Bifidobacterium longum NCC2705
*
Bifidobacterium longum subsp. infantis ATCC 15697

Site:
position = -92
score = 6.08233
sequence = ACCAACCGGCTGGTAGGT

Gene: Blon_0624: Predicted beta-glucoside specific transcriptional regulator, TetR family
 
Gardnerella vaginalis 409-05
Predicted beta-glucoside specific transcriptional regulator, TetR family
 
CRON 2.
bglX1
*
Bifidobacterium adolescentis ATCC 15703

Site:
position = -93
score = 6.04119
sequence = ACCTACCGACCGGTTAGT

Gene: BAD_1194: Beta-glucosidase (EC 3.2.1.21)
*
Bifidobacterium angulatum DSM 20098

Site:
position = -75
score = 6.45257
sequence = ACCTACCAATCGGTTGGT

Gene: BIFANG_00896: Beta-glucosidase (EC 3.2.1.21)
 
Bifidobacterium animalis subsp. lactis AD011

Gene: BLA_0039: Beta-glucosidase (EC 3.2.1.21)
 
Bifidobacterium bifidum NCIMB 41171
*
Bifidobacterium breve DSM 20213

Site:
position = -172
score = 6.26745
sequence = ACCTACCAACCGGTTGGT

Gene: BIFBRE_00468: Beta-glucosidase (EC 3.2.1.21)
*
Bifidobacterium dentium Bd1

Site:
position = -65
score = 6.45257
sequence = ACCTACCAATCGGTTGGT

Gene: BDP_1657: Beta-glucosidase (EC 3.2.1.21)
 
Bifidobacterium gallicum DSM 20093
 
Bifidobacterium longum NCC2705
*
Bifidobacterium longum subsp. infantis ATCC 15697

Site:
position = -142
score = 6.08233
sequence = ACCTACCAGCCGGTTGGT

Gene: Blon_0625: Beta-glucosidase (EC 3.2.1.21)
 
Gardnerella vaginalis 409-05
Beta-glucosidase (EC 3.2.1.21)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD