Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog BgrT4 - Bifidobacteriaceae

Properties
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode:
Biological process: Beta-glucosides utilization
Effector:
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bifidobacterium adolescentis ATCC 15703 4 3
Bifidobacterium angulatum DSM 20098
Bifidobacterium animalis subsp. lactis AD011
Bifidobacterium bifidum NCIMB 41171
Bifidobacterium breve DSM 20213
Bifidobacterium dentium Bd1 6 4
Bifidobacterium gallicum DSM 20093
Bifidobacterium longum NCC2705
Bifidobacterium longum subsp. infantis ATCC 15697
Gardnerella vaginalis 409-05
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
bglY
*
Bifidobacterium adolescentis ATCC 15703

Site:
position = -60
score = 4.48808
sequence = TCTAACTTAGTAATTACT

Gene: BAD_1204: Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)
 
Bifidobacterium angulatum DSM 20098
 
Bifidobacterium animalis subsp. lactis AD011
 
Bifidobacterium bifidum NCIMB 41171
 
Bifidobacterium breve DSM 20213
*
Bifidobacterium dentium Bd1

Site:
position = -60
score = 6.01124
sequence = TTTAACTAAGTAGTTACT

Gene: BDP_1678: Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)
 
Bifidobacterium gallicum DSM 20093
 
Bifidobacterium longum NCC2705
 
Bifidobacterium longum subsp. infantis ATCC 15697
 
Gardnerella vaginalis 409-05
Glucan 1,3-beta-glucosidase precursor (EC 3.2.1.58)
xynB
 
Bifidobacterium adolescentis ATCC 15703

Gene: BAD_1203: Beta-xylosidase (EC 3.2.1.37)
 
Bifidobacterium angulatum DSM 20098
 
Bifidobacterium animalis subsp. lactis AD011
 
Bifidobacterium bifidum NCIMB 41171
 
Bifidobacterium breve DSM 20213
 
Bifidobacterium dentium Bd1

Gene: BDP_1677: Beta-xylosidase (EC 3.2.1.37)
 
Bifidobacterium gallicum DSM 20093
 
Bifidobacterium longum NCC2705
 
Bifidobacterium longum subsp. infantis ATCC 15697
 
Gardnerella vaginalis 409-05
Beta-xylosidase (EC 3.2.1.37)
 
CRON 2.
bglX4
 
Bifidobacterium adolescentis ATCC 15703
 
Bifidobacterium angulatum DSM 20098
 
Bifidobacterium animalis subsp. lactis AD011
 
Bifidobacterium bifidum NCIMB 41171
 
Bifidobacterium breve DSM 20213
*
Bifidobacterium dentium Bd1

Site:
position = -60
score = 5.65957
sequence = ATTAACTATGTAGTTAAT

Site:
position = -102
score = 6.00292
sequence = ATTAACTACGTAGTTAAT

Gene: BDP_0208: Beta-glucosidase (EC 3.2.1.21)
 
Bifidobacterium gallicum DSM 20093
 
Bifidobacterium longum NCC2705
 
Bifidobacterium longum subsp. infantis ATCC 15697
 
Gardnerella vaginalis 409-05
Beta-glucosidase (EC 3.2.1.21)
bglT4
 
Bifidobacterium adolescentis ATCC 15703
 
Bifidobacterium angulatum DSM 20098
 
Bifidobacterium animalis subsp. lactis AD011
 
Bifidobacterium bifidum NCIMB 41171
 
Bifidobacterium breve DSM 20213
 
Bifidobacterium dentium Bd1

Gene: BDP_0209: Predicted beta-glucoside permease, MFS family
 
Bifidobacterium gallicum DSM 20093
 
Bifidobacterium longum NCC2705
 
Bifidobacterium longum subsp. infantis ATCC 15697
 
Gardnerella vaginalis 409-05
Predicted beta-glucoside permease, MFS family
 
CRON 3.
bgrT4
*
Bifidobacterium adolescentis ATCC 15703

Site:
position = -125
score = 5.96223
sequence = AGTAACTGCTTAGTTAAA

Gene: BAD_1210: Predicted beta-glucoside specific transcriptional regulator, TetR family
 
Bifidobacterium angulatum DSM 20098
 
Bifidobacterium animalis subsp. lactis AD011
 
Bifidobacterium bifidum NCIMB 41171
 
Bifidobacterium breve DSM 20213
*
Bifidobacterium dentium Bd1

Site:
position = -123
score = 5.96223
sequence = AGTAACTGCTTAGTTAAA

Gene: BDP_1682: Predicted beta-glucoside specific transcriptional regulator, TetR family
 
Bifidobacterium gallicum DSM 20093
 
Bifidobacterium longum NCC2705
 
Bifidobacterium longum subsp. infantis ATCC 15697
 
Gardnerella vaginalis 409-05
Predicted beta-glucoside specific transcriptional regulator, TetR family
 
CRON 4.
bglT
*
Bifidobacterium adolescentis ATCC 15703

Site:
position = -248
score = 5.96223
sequence = TTTAACTAAGCAGTTACT

Gene: BAD_1209: Predicted beta-glucoside permease, MFS family
 
Bifidobacterium angulatum DSM 20098
 
Bifidobacterium animalis subsp. lactis AD011
 
Bifidobacterium bifidum NCIMB 41171
 
Bifidobacterium breve DSM 20213
*
Bifidobacterium dentium Bd1

Site:
position = -221
score = 5.96223
sequence = TTTAACTAAGCAGTTACT

Gene: BDP_1681: Predicted beta-glucoside permease, MFS family
 
Bifidobacterium gallicum DSM 20093
 
Bifidobacterium longum NCC2705
 
Bifidobacterium longum subsp. infantis ATCC 15697
 
Gardnerella vaginalis 409-05
Predicted beta-glucoside permease, MFS family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD