Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog BgrT3 - Bifidobacteriaceae

Properties
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode:
Biological process: Galactosides utilization
Effector:
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bifidobacterium adolescentis ATCC 15703 1 1
Bifidobacterium angulatum DSM 20098
Bifidobacterium animalis subsp. lactis AD011 2 2
Bifidobacterium bifidum NCIMB 41171
Bifidobacterium breve DSM 20213
Bifidobacterium dentium Bd1 1 1
Bifidobacterium gallicum DSM 20093
Bifidobacterium longum NCC2705
Gardnerella vaginalis 409-05
Bifidobacterium longum subsp. infantis ATCC 15697
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
bgaT
 
Bifidobacterium adolescentis ATCC 15703

Gene: BAD_1206: Predicted beta-galactoside permease, MFS family
 
Bifidobacterium angulatum DSM 20098
*
Bifidobacterium animalis subsp. lactis AD011

Site:
position = -216
score = 5.36009
sequence = ATCTACTTTATGGTAGAT

Site:
position = -78
score = 4.83119
sequence = AACTATTAGGTGGTAGTT

Gene: BLA_0045: Predicted beta-galactoside permease, MFS family
 
Bifidobacterium bifidum NCIMB 41171
 
Bifidobacterium breve DSM 20213
 
Bifidobacterium dentium Bd1
 
Bifidobacterium gallicum DSM 20093
 
Bifidobacterium longum NCC2705
 
Gardnerella vaginalis 409-05
 
Bifidobacterium longum subsp. infantis ATCC 15697
Predicted beta-galactoside permease, MFS family
 
CRON 2.
bga
*
Bifidobacterium adolescentis ATCC 15703

Site:
position = -202
score = 5.06773
sequence = ATCTAATGTTTATTAGGT

Site:
position = -124
score = 5.96005
sequence = ATCTAATACTTGTTAGAT

Gene: BAD_1211: Beta-galactosidase (EC 3.2.1.23)
 
Bifidobacterium angulatum DSM 20098
*
Bifidobacterium animalis subsp. lactis AD011

Site:
position = -106
score = 5.53356
sequence = ATCTACCATAAAGTAGAT

Site:
position = -244
score = 5.25472
sequence = AACTACCACCTAATAGTT

Gene: BLA_0044: Beta-galactosidase (EC 3.2.1.23)
 
Bifidobacterium bifidum NCIMB 41171
 
Bifidobacterium breve DSM 20213
*
Bifidobacterium dentium Bd1

Site:
position = -142
score = 5.01047
sequence = TTCTAATGGATGTTAGAT

Site:
position = -62
score = 5.64181
sequence = ATCTAATAACCGTTAGAT

Gene: BDP_1683: Beta-galactosidase (EC 3.2.1.23)
 
Bifidobacterium gallicum DSM 20093
 
Bifidobacterium longum NCC2705
 
Gardnerella vaginalis 409-05
 
Bifidobacterium longum subsp. infantis ATCC 15697
Beta-galactosidase (EC 3.2.1.23)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD