Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog GlnR - Staphylococcaceae

Properties
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Nitrogen assimilation
Effector: Feedback-inhibited GlnA, glutamine synthetase
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 14 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Staphylococcus aureus subsp. aureus N315 3 2
Staphylococcus capitis SK14 3 2
Staphylococcus epidermidis ATCC 12228 3 2
Staphylococcus carnosus subsp. carnosus TM300 2 1
Staphylococcus haemolyticus JCSC1435 3 2
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 3 2
Macrococcus caseolyticus JCSC5402 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nrgA
*
Staphylococcus aureus subsp. aureus N315

Site:
position = -73
score = 4.55614
sequence = ATGTAATAAAACTTAACGC

Gene: SA1848: ammonium transporter
*
Staphylococcus capitis SK14

Site:
position = -96
score = 5.32086
sequence = ATGTCACTTAATCTTACAC

Gene: STACA0001_2123: ammonium transporter
*
Staphylococcus epidermidis ATCC 12228

Site:
position = -96
score = 5.25894
sequence = ATGTAACTTAAAGTGACAT

Site:
position = -74
score = 4.45319
sequence = GTGTAACATGACCTTACCT

Gene: SE1644: ammonium transporter
 
Staphylococcus carnosus subsp. carnosus TM300
*
Staphylococcus haemolyticus JCSC1435

Site:
position = -74
score = 4.74731
sequence = GTGTCATTTTATCTTACAC

Site:
position = -96
score = 4.78809
sequence = TTGTTATATTATGTAACAT

Gene: SH0989: ammonium transporter
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Site:
position = -96
score = 4.83095
sequence = GCGTTAGAAAAGGTAACAT

Gene: SSP2288: ammonium transporter
 
Macrococcus caseolyticus JCSC5402
ammonium transporter
 
CRON 2.
glnR
*
Staphylococcus aureus subsp. aureus N315

Site:
position = -84
score = 5.87041
sequence = ATGTTAGAAAACCTGACAT

Gene: SA1149: HTH-type transcriptional regulator GlnR
*
Staphylococcus capitis SK14

Site:
position = -85
score = 5.97003
sequence = ATGTTAGAAAACCTTACAT

Gene: STACA0001_1553: HTH-type transcriptional regulator GlnR
*
Staphylococcus epidermidis ATCC 12228

Site:
position = -88
score = 5.94521
sequence = ATGTCAGAAAACCTTACAT

Gene: SE0986: HTH-type transcriptional regulator GlnR
*
Staphylococcus carnosus subsp. carnosus TM300

Site:
position = -85
score = 5.94521
sequence = ATGTCAGAAAACCTTACAT

Gene: Sca_0958: HTH-type transcriptional regulator GlnR
*
Staphylococcus haemolyticus JCSC1435

Site:
position = -86
score = 5.97003
sequence = ATGTAAGAAAACCTAACAT

Gene: SH1601: HTH-type transcriptional regulator GlnR
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Site:
position = -83
score = 5.97003
sequence = ATGTTAGAAAACCTTACAT

Gene: SSP1452: HTH-type transcriptional regulator GlnR
*
Macrococcus caseolyticus JCSC5402

Site:
position = -103
score = 5.9966
sequence = ATGTAAGGTTTCCTTACAT

Gene: MCCL_0899: HTH-type transcriptional regulator GlnR
HTH-type transcriptional regulator GlnR
glnA
 
Staphylococcus aureus subsp. aureus N315

Gene: SA1150: glutamine synthetase
 
Staphylococcus capitis SK14

Gene: STACA0001_1554: glutamine synthetase
 
Staphylococcus epidermidis ATCC 12228

Gene: SE0987: glutamine synthetase
 
Staphylococcus carnosus subsp. carnosus TM300

Gene: Sca_0957: glutamine synthetase
 
Staphylococcus haemolyticus JCSC1435

Gene: SH1600: glutamine synthetase
 
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Gene: SSP1451: glutamine synthetase
 
Macrococcus caseolyticus JCSC5402

Gene: MCCL_0900: glutamine synthetase
glutamine synthetase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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