Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog HspR - Mycobacteriaceae

Properties
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Heat shock response
Effector: Heat shock
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 38 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Mycobacterium avium 104 6 3
Mycobacterium abscessus ATCC 19977 6 3
Mycobacterium leprae TN 5 2
Mycobacterium flavescens PYR-GCK 7 4
Mycobacterium marinum M 6 3
Mycobacterium smegmatis str. MC2 155 7 4
Mycobacterium sp. JLS 7 4
Mycobacterium tuberculosis H37Rv 6 3
Mycobacterium vanbaalenii PYR-1 7 4
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
lon
 
Mycobacterium avium 104
 
Mycobacterium abscessus ATCC 19977
 
Mycobacterium leprae TN
*
Mycobacterium flavescens PYR-GCK

Site:
position = -49
score = 5.0393
sequence = TTGAGCGCATCAGGTTCAA

Gene: Mflv_3336: ATP-dependent Lon protease
 
Mycobacterium marinum M

Gene: MMAR_2751: ATP-dependent Lon protease
*
Mycobacterium smegmatis str. MC2 155

Site:
position = -32
score = 5.20676
sequence = TTGAGTGCATCAGACTGAA

Gene: MSMEG_3582: ATP-dependent Lon protease
*
Mycobacterium sp. JLS

Site:
position = -33
score = 5.12765
sequence = TTGAGTCGATCTGACTGAA

Gene: Mjls_2802: ATP-dependent Lon protease
 
Mycobacterium tuberculosis H37Rv
*
Mycobacterium vanbaalenii PYR-1

Site:
position = -32
score = 5.0393
sequence = TTGAGCGCATCAGGTTCAA

Gene: Mvan_3064: ATP-dependent Lon protease
ATP-dependent Lon protease
 
CRON 2.
hsp
*
Mycobacterium avium 104

Site:
position = -99
score = 4.941
sequence = TTAAGCGTGGTCGACTCAT

Gene: MAV_4906: Heat shock protein Hsp20
*
Mycobacterium abscessus ATCC 19977

Site:
position = -74
score = 4.93929
sequence = TTAAGCGCACGGCACTCAA

Gene: MAB_4402: Heat shock protein Hsp20
 
Mycobacterium leprae TN
*
Mycobacterium flavescens PYR-GCK

Site:
position = -72
score = 5.34345
sequence = ATGAGCGTACCCGACTCAA

Gene: Mflv_0388: Heat shock protein Hsp20
*
Mycobacterium marinum M

Site:
position = -89
score = 4.80327
sequence = TTTAGCGTGGTCGACTCAT

Gene: MMAR_0515: Heat shock protein Hsp20
*
Mycobacterium smegmatis str. MC2 155

Site:
position = -81
score = 5.34345
sequence = ATGAGCGTGGTCGACTCAA

Gene: MSMEG_0424: Heat shock protein Hsp20
*
Mycobacterium sp. JLS

Site:
position = -78
score = 5.31736
sequence = ATGAGCGCGGTCGACTCAA

Gene: Mjls_0247: Heat shock protein Hsp20
*
Mycobacterium tuberculosis H37Rv

Site:
position = -88
score = 4.92239
sequence = TTAAGCGTGGTCGACTCAG

Gene: Rv0251c: Heat shock protein Hsp20
*
Mycobacterium vanbaalenii PYR-1

Site:
position = -72
score = 5.03785
sequence = ATGAGCGCCGTCGACTCAA

Gene: Mvan_0296: Heat shock protein Hsp20
Heat shock protein Hsp20
 
CRON 3.
dnaK
*
Mycobacterium avium 104

Site:
position = -64
score = 5.32133
sequence = TTGAGCGGGGTTCACTCAG

Site:
position = -119
score = 5.11034
sequence = TTGAGCGAACCGGACTGAA

Gene: MAV_4808: Chaperone protein DnaK
*
Mycobacterium abscessus ATCC 19977

Site:
position = -105
score = 5.15222
sequence = TTGAGTCACATTGACTCAA

Site:
position = -51
score = 5.22262
sequence = TTGAGCGGATCTCACTGAA

Gene: MAB_4273c: Chaperone protein DnaK
*
Mycobacterium leprae TN

Site:
position = -70
score = 4.82979
sequence = TTGAGTTAAGTTCACTCAG

Gene: ML2496: Chaperone protein DnaK
*
Mycobacterium flavescens PYR-GCK

Site:
position = -61
score = 5.26192
sequence = TTGAGCCCGGTGCACTCAT

Site:
position = -116
score = 5.22125
sequence = TTGAGTCACATAGACTCAA

Gene: Mflv_0260: Chaperone protein DnaK
*
Mycobacterium marinum M

Site:
position = -117
score = 5.12731
sequence = TTGAGCGAACCATACTCAA

Site:
position = -61
score = 5.32133
sequence = TTGAGCGGGGTTCACTCAG

Gene: MMAR_0637: Chaperone protein DnaK
*
Mycobacterium smegmatis str. MC2 155

Site:
position = -47
score = 5.37606
sequence = TTGAGCGCAGTCCGCTCAG

Site:
position = -102
score = 5.31611
sequence = TTGAGTGACATCGACTCAA

Gene: MSMEG_0709: Chaperone protein DnaK
*
Mycobacterium sp. JLS

Site:
position = -114
score = 5.58325
sequence = TTGAGTGAACTTCGCTCAA

Site:
position = -59
score = 5.36426
sequence = TTGAGTGCGGTCCGCTCAG

Gene: Mjls_0449: Chaperone protein DnaK
*
Mycobacterium tuberculosis H37Rv

Site:
position = -116
score = 5.26072
sequence = TTGAGTGCATCAGGCTCAG

Site:
position = -62
score = 5.38288
sequence = TTGAGCGGGGTGCACTCAT

Gene: Rv0350: Chaperone protein DnaK
*
Mycobacterium vanbaalenii PYR-1

Site:
position = -108
score = 5.00577
sequence = TTGAGTGATACAGACTCAA

Site:
position = -53
score = 5.27937
sequence = TTGAGTCCGGTGCACTCAG

Gene: Mvan_0634: Chaperone protein DnaK
Chaperone protein DnaK
grpE
 
Mycobacterium avium 104

Gene: MAV_4807: Heat shock protein GrpE
 
Mycobacterium abscessus ATCC 19977

Gene: MAB_4272c: Heat shock protein GrpE
 
Mycobacterium leprae TN

Gene: ML2495: Heat shock protein GrpE
 
Mycobacterium flavescens PYR-GCK

Gene: Mflv_0259: Heat shock protein GrpE
 
Mycobacterium marinum M

Gene: MMAR_0638: Heat shock protein GrpE
 
Mycobacterium smegmatis str. MC2 155

Gene: MSMEG_0710: Heat shock protein GrpE
 
Mycobacterium sp. JLS

Gene: Mjls_0450: Heat shock protein GrpE
 
Mycobacterium tuberculosis H37Rv

Gene: Rv0351: Heat shock protein GrpE
 
Mycobacterium vanbaalenii PYR-1

Gene: Mvan_0635: Heat shock protein GrpE
Heat shock protein GrpE
dnaJ
 
Mycobacterium avium 104

Gene: MAV_4806: Chaperone protein DnaJ
 
Mycobacterium abscessus ATCC 19977

Gene: MAB_4271c: Chaperone protein DnaJ
 
Mycobacterium leprae TN

Gene: ML2494: Chaperone protein DnaJ
 
Mycobacterium flavescens PYR-GCK

Gene: Mflv_0258: Chaperone protein DnaJ
 
Mycobacterium marinum M

Gene: MMAR_0639: Chaperone protein DnaJ
 
Mycobacterium smegmatis str. MC2 155

Gene: MSMEG_0711: Chaperone protein DnaJ
 
Mycobacterium sp. JLS

Gene: Mjls_0451: Chaperone protein DnaJ
 
Mycobacterium tuberculosis H37Rv

Gene: Rv0352: Chaperone protein DnaJ
 
Mycobacterium vanbaalenii PYR-1

Gene: Mvan_0636: Chaperone protein DnaJ
Chaperone protein DnaJ
hspR
 
Mycobacterium avium 104

Gene: MAV_4805: Heat shock response transcriptional regulator HspR, MerR family
 
Mycobacterium abscessus ATCC 19977

Gene: MAB_4270c: Heat shock response transcriptional regulator HspR, MerR family
 
Mycobacterium leprae TN

Gene: ML2493: Heat shock response transcriptional regulator HspR, MerR family
 
Mycobacterium flavescens PYR-GCK

Gene: Mflv_0257: Heat shock response transcriptional regulator HspR, MerR family
 
Mycobacterium marinum M

Gene: MMAR_0640: Heat shock response transcriptional regulator HspR, MerR family
 
Mycobacterium smegmatis str. MC2 155

Gene: MSMEG_0713: Heat shock response transcriptional regulator HspR, MerR family
 
Mycobacterium sp. JLS

Gene: Mjls_0452: Heat shock response transcriptional regulator HspR, MerR family
 
Mycobacterium tuberculosis H37Rv

Gene: Rv0353: Heat shock response transcriptional regulator HspR, MerR family
 
Mycobacterium vanbaalenii PYR-1

Gene: Mvan_0637: Heat shock response transcriptional regulator HspR, MerR family
Heat shock response transcriptional regulator HspR, MerR family
 
CRON 4.
clpB
*
Mycobacterium avium 104

Site:
position = -78
score = 5.62858
sequence = TTGAGCGGAACAGACTCAA

Gene: MAV_4793: ATP-dependent chaperone ClpB
*
Mycobacterium abscessus ATCC 19977

Site:
position = -73
score = 5.62858
sequence = TTGAGCGGAACAGACTCAA

Gene: MAB_4265c: ATP-dependent chaperone ClpB
*
Mycobacterium leprae TN

Site:
position = -80
score = 5.2622
sequence = TTGAGTGGAACAGACTTAA

Gene: ML2490: ATP-dependent chaperone ClpB
*
Mycobacterium flavescens PYR-GCK

Site:
position = -96
score = 5.62858
sequence = TTGAGCGGAACAGACTCAA

Gene: Mflv_0246: ATP-dependent chaperone ClpB
*
Mycobacterium marinum M

Site:
position = -82
score = 5.62858
sequence = TTGAGCGGAACAGACTCAA

Gene: MMAR_0645: ATP-dependent chaperone ClpB
*
Mycobacterium smegmatis str. MC2 155

Site:
position = -76
score = 5.62858
sequence = TTGAGCGGAACAGACTCAA

Gene: MSMEG_0732: ATP-dependent chaperone ClpB
*
Mycobacterium sp. JLS

Site:
position = -74
score = 5.62858
sequence = TTGAGCGGAACAGACTCAA

Gene: Mjls_0467: ATP-dependent chaperone ClpB
*
Mycobacterium tuberculosis H37Rv

Site:
position = -77
score = 5.62858
sequence = TTGAGCGGAACAGACTCAA

Gene: Rv0384c: ATP-dependent chaperone ClpB
*
Mycobacterium vanbaalenii PYR-1

Site:
position = -96
score = 5.6941
sequence = TTGAGCGGAACACACTCAA

Gene: Mvan_0659: ATP-dependent chaperone ClpB
ATP-dependent chaperone ClpB
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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