Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog FapR - Staphylococcaceae

Properties
Regulator type: Transcription factor
Regulator family: FapR
Regulation mode: repressor
Biological process: Fatty acid biosynthesis
Effector: Malonyl-CoA; Malonyl-ACP
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 30 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Staphylococcus aureus subsp. aureus N315 8 4
Staphylococcus capitis SK14 10 5
Staphylococcus epidermidis ATCC 12228 8 4
Staphylococcus carnosus subsp. carnosus TM300 7 3
Staphylococcus haemolyticus JCSC1435 10 5
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 9 4
Macrococcus caseolyticus JCSC5402 10 5
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
scoA
 
Staphylococcus aureus subsp. aureus N315
 
Staphylococcus capitis SK14
 
Staphylococcus epidermidis ATCC 12228
 
Staphylococcus carnosus subsp. carnosus TM300
 
Staphylococcus haemolyticus JCSC1435
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Site:
position = -46
score = 6.06791
sequence = ATTAGTACTAGGTATTAAA

Gene: SSP2200: succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A
 
Macrococcus caseolyticus JCSC5402
succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A
scoB
 
Staphylococcus aureus subsp. aureus N315
 
Staphylococcus capitis SK14
 
Staphylococcus epidermidis ATCC 12228
 
Staphylococcus carnosus subsp. carnosus TM300
 
Staphylococcus haemolyticus JCSC1435
 
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Gene: SSP2199: succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B
 
Macrococcus caseolyticus JCSC5402
succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B
 
CRON 2.
perR
*
Staphylococcus aureus subsp. aureus N315

Site:
position = -49
score = 4.75387
sequence = ATTTATAGTAAGTAATAAT

Gene: SA1678: peroxide-responsive repressor PerR
*
Staphylococcus capitis SK14

Site:
position = -48
score = 5.35521
sequence = ATTAATATTAAGTAATAAT

Gene: STACA0001_1914: peroxide-responsive repressor PerR
*
Staphylococcus epidermidis ATCC 12228

Site:
position = -48
score = 5.35521
sequence = ATTAATATTAAGTAATAAT

Gene: SE1545: peroxide-responsive repressor PerR
*
Staphylococcus carnosus subsp. carnosus TM300

Site:
position = -48
score = 4.75387
sequence = ATTTATAGTAAGTAATAAT

Gene: Sca_1434: peroxide-responsive repressor PerR
*
Staphylococcus haemolyticus JCSC1435

Site:
position = -47
score = 5.51485
sequence = ATTAATATCAAGTAATAAT

Gene: SH1102: peroxide-responsive repressor PerR
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Site:
position = -48
score = 5.35521
sequence = ATTAATATTAAGTAATAAT

Gene: SSP0932: peroxide-responsive repressor PerR
 
Macrococcus caseolyticus JCSC5402

Gene: MCCL_1591: peroxide-responsive repressor PerR
peroxide-responsive repressor PerR
 
CRON 3.
fapR
*
Staphylococcus aureus subsp. aureus N315

Site:
position = -36
score = 5.96857
sequence = TTTAAGACTAGGTACTAAA

Gene: SA1071: transcriptional regulator of fatty acid biosynthesis
*
Staphylococcus capitis SK14

Site:
position = -34
score = 5.96857
sequence = TTTAAGACTTGGTACTAAA

Gene: STACA0001_2225: transcriptional regulator of fatty acid biosynthesis
*
Staphylococcus epidermidis ATCC 12228

Site:
position = 17
score = 5.96857
sequence = TTTAAGACTTGGTACTAAA

Gene: SE0903: transcriptional regulator of fatty acid biosynthesis
 
Staphylococcus carnosus subsp. carnosus TM300
*
Staphylococcus haemolyticus JCSC1435

Site:
position = -42
score = 5.88983
sequence = TTTAAGACTTGGTACTAAT

Gene: SH1686: transcriptional regulator of fatty acid biosynthesis
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Site:
position = -39
score = 5.96857
sequence = TTTAAGACTTGGTACTAAA

Gene: SSP1541: transcriptional regulator of fatty acid biosynthesis
*
Macrococcus caseolyticus JCSC5402

Site:
position = -34
score = 5.45574
sequence = ATTAAGACCAACTACTAAT

Gene: MCCL_0813: transcriptional regulator of fatty acid biosynthesis
transcriptional regulator of fatty acid biosynthesis
plsX
 
Staphylococcus aureus subsp. aureus N315

Gene: SA1072: fatty acid/phospholipid synthesis protein PlsX
 
Staphylococcus capitis SK14

Gene: STACA0001_2226: fatty acid/phospholipid synthesis protein PlsX
 
Staphylococcus epidermidis ATCC 12228

Gene: SE0904: fatty acid/phospholipid synthesis protein PlsX
 
Staphylococcus carnosus subsp. carnosus TM300

Gene: Sca_0852: fatty acid/phospholipid synthesis protein PlsX
 
Staphylococcus haemolyticus JCSC1435

Gene: SH1685: fatty acid/phospholipid synthesis protein PlsX
 
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Gene: SSP1540: fatty acid phospholipid synthesis protein PlsX
 
Macrococcus caseolyticus JCSC5402

Gene: MCCL_0814: fatty acid/phospholipid synthesis protein PlsX
fatty acid/phospholipid synthesis protein PlsX
fabD
 
Staphylococcus aureus subsp. aureus N315

Gene: SA1073: malonyl CoA-acyl carrier protein transacylase
 
Staphylococcus capitis SK14

Gene: STACA0001_2227: malonyl CoA-acyl carrier protein transacylase
 
Staphylococcus epidermidis ATCC 12228

Gene: SE0905: malonyl CoA-acyl carrier protein transacylase
 
Staphylococcus carnosus subsp. carnosus TM300

Gene: Sca_0853: malonyl CoA-acyl carrier protein transacylase
 
Staphylococcus haemolyticus JCSC1435

Gene: SH1684: malonyl CoA-acyl carrier protein transacylase
 
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Gene: SSP1539: malonyl CoA-acyl carrier protein transacylase
 
Macrococcus caseolyticus JCSC5402

Gene: MCCL_0815: malonyl CoA-acyl carrier protein transacylase
malonyl CoA-acyl carrier protein transacylase
fabG
 
Staphylococcus aureus subsp. aureus N315

Gene: SA1074: 3-oxoacyl-(acyl-carrier protein) reductase
 
Staphylococcus capitis SK14

Gene: STACA0001_2228: 3-oxoacyl-(acyl-carrier protein) reductase
 
Staphylococcus epidermidis ATCC 12228

Gene: SE0906: 3-oxoacyl-(acyl-carrier protein) reductase
 
Staphylococcus carnosus subsp. carnosus TM300

Gene: Sca_0854: 3-oxoacyl-(acyl-carrier protein) reductase
 
Staphylococcus haemolyticus JCSC1435

Gene: SH1683: 3-oxoacyl-(acyl-carrier protein) reductase
 
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Gene: SSP1538: 3-oxoacyl-(acyl-carrier protein) reductase
 
Macrococcus caseolyticus JCSC5402

Gene: MCCL_0816: 3-oxoacyl-(acyl-carrier protein) reductase
3-oxoacyl-(acyl-carrier protein) reductase
fapR
 
Staphylococcus aureus subsp. aureus N315
 
Staphylococcus capitis SK14
 
Staphylococcus epidermidis ATCC 12228
*
Staphylococcus carnosus subsp. carnosus TM300

Site:
position = -36
score = 5.55185
sequence = CTTAAGACTTGGTACTAAA

Gene: Sca_0851: transcriptional regulator of fatty acid biosynthesis
 
Staphylococcus haemolyticus JCSC1435
 
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
 
Macrococcus caseolyticus JCSC5402
transcriptional regulator of fatty acid biosynthesis
 
CRON 4.
fabI
*
Staphylococcus aureus subsp. aureus N315

Site:
position = -111
score = 4.70365
sequence = TTTATTAAAAAGTCATAAT

Gene: SA0869: enoyl-(acyl carrier protein) reductase
*
Staphylococcus capitis SK14

Site:
position = -112
score = 5.79128
sequence = TTTATTATCAGGTACTAAA

Gene: STACA0001_0124: enoyl-(acyl carrier protein) reductase
*
Staphylococcus epidermidis ATCC 12228

Site:
position = -109
score = 5.79128
sequence = TTTATTATCAGGTACTAAA

Gene: SE0712: enoyl-(acyl carrier protein) reductase
 
Staphylococcus carnosus subsp. carnosus TM300

Gene: Sca_0612: enoyl-(acyl carrier protein) reductase
*
Staphylococcus haemolyticus JCSC1435

Site:
position = -131
score = 5.28643
sequence = TATATGACCAGGTAATAAT

Gene: SH1947: enoyl-(acyl carrier protein) reductase
 
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Gene: SSP1774: enoyl-(acyl carrier protein) reductase
*
Macrococcus caseolyticus JCSC5402

Site:
position = -45
score = 5.26621
sequence = TTTAGTAGTAGGTACTAGA

Gene: MCCL_0625: enoyl-[acyl-carrier-protein] reductase
enoyl-(acyl carrier protein) reductase
 
CRON 5.
fabH
*
Staphylococcus aureus subsp. aureus N315

Site:
position = -44
score = 6.26824
sequence = ATTAATACCTGGTATTAAA

Gene: SA0842: 3-oxoacyl-[acyl-carrier-protein] synthase III
*
Staphylococcus capitis SK14

Site:
position = -44
score = 6.26824
sequence = ATTAATACCTGGTATTAAA

Gene: STACA0001_0149: 3-oxoacyl-[acyl-carrier-protein] synthase III
*
Staphylococcus epidermidis ATCC 12228

Site:
position = -43
score = 6.26824
sequence = ATTAATACCTGGTATTAAA

Gene: SE0677: 3-oxoacyl-[acyl-carrier-protein] synthase III
*
Staphylococcus carnosus subsp. carnosus TM300

Site:
position = -44
score = 6.26824
sequence = ATTAATACCTGGTATTAAA

Gene: Sca_0584: putative 3-oxoacyl-[acyl-carrier-protein] synthase III
*
Staphylococcus haemolyticus JCSC1435

Site:
position = -44
score = 6.26824
sequence = ATTAATACCTGGTATTAAA

Gene: SH1973: 3-oxoacyl-[acyl-carrier-protein] synthase III
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Site:
position = -44
score = 6.26824
sequence = ATTAATACCTGGTATTAAA

Gene: SSP1798: 3-oxoacyl-[acyl-carrier-protein] synthase III
*
Macrococcus caseolyticus JCSC5402

Site:
position = -42
score = 5.83151
sequence = ATTAGTACCAGATACTAAA

Gene: MCCL_0603: 3-oxoacyl-[acyl-carrier-protein] synthase III
3-oxoacyl-[acyl-carrier-protein] synthase III
fabF
 
Staphylococcus aureus subsp. aureus N315

Gene: SA0843: 3-oxoacyl-[acyl-carrier-protein] synthase II
 
Staphylococcus capitis SK14

Gene: STACA0001_0148: 3-oxoacyl-[acyl-carrier-protein] synthase II
 
Staphylococcus epidermidis ATCC 12228

Gene: SE0678: 3-oxoacyl-[acyl-carrier-protein] synthase II
 
Staphylococcus carnosus subsp. carnosus TM300

Gene: Sca_0585: 3-oxoacyl-[acyl-carrier-protein] synthase II
 
Staphylococcus haemolyticus JCSC1435

Gene: SH1972: 3-oxoacyl-[acyl-carrier-protein] synthase
 
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Gene: SSP1797: 3-oxoacyl-[acyl-carrier-protein] synthase II
 
Macrococcus caseolyticus JCSC5402

Gene: MCCL_0604: 3-oxoacyl-[acyl-carrier-protein] synthase II
3-oxoacyl-[acyl-carrier-protein] synthase II
 
CRON 6.
desA
 
Staphylococcus aureus subsp. aureus N315
 
Staphylococcus capitis SK14
 
Staphylococcus epidermidis ATCC 12228
 
Staphylococcus carnosus subsp. carnosus TM300
 
Staphylococcus haemolyticus JCSC1435
 
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
*
Macrococcus caseolyticus JCSC5402

Site:
position = -100
score = 5.82951
sequence = ATTAGTACTAGGTAATAAT

Gene: MCCL_0154: Omega-6 fatty acid desaturase
Omega-6 fatty acid desaturase
 
CRON 7.
accB
 
Staphylococcus aureus subsp. aureus N315

Gene: SA1358: acetyl-CoA carboxylase biotin carboxyl carrier subunit
*
Staphylococcus capitis SK14

Site:
position = -164
score = 4.48303
sequence = ATTAATAATCATTACTAAA

Gene: STACA0001_1765: acetyl-CoA carboxylase biotin carboxyl carrier subunit
 
Staphylococcus epidermidis ATCC 12228

Gene: SE1208: acetyl-CoA carboxylase biotin carboxyl carrier subunit
 
Staphylococcus carnosus subsp. carnosus TM300

Gene: Sca_1151: acetyl-CoA carboxylase biotin carboxyl carrier subunit
*
Staphylococcus haemolyticus JCSC1435

Site:
position = -121
score = 4.39831
sequence = AATAATAATAAGCATTAAA

Gene: SH1388: acetyl-CoA carboxylase biotin carboxyl carrier subunit
 
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Gene: SSP1227: acetyl-CoA carboxylase biotin carboxyl carrier subunit
*
Macrococcus caseolyticus JCSC5402

Site:
position = -41
score = 5.53448
sequence = ATTAGTAGCTAGTCTTAAA

Gene: MCCL_1173: acetyl-CoA carboxylase biotin carboxyl carrier subunit
acetyl-CoA carboxylase biotin carboxyl carrier subunit
accC
 
Staphylococcus aureus subsp. aureus N315

Gene: SA1357: biotin carboxylase subunit of acetyl-CoA carboxylase
 
Staphylococcus capitis SK14

Gene: STACA0001_1764: biotin carboxylase subunit of acetyl-CoA carboxylase
 
Staphylococcus epidermidis ATCC 12228

Gene: SE1207: biotin carboxylase subunit of acetyl-CoA carboxylase
 
Staphylococcus carnosus subsp. carnosus TM300

Gene: Sca_1150: biotin carboxylase subunit of acetyl-CoA carboxylase
 
Staphylococcus haemolyticus JCSC1435

Gene: SH1389: biotin carboxylase subunit of acetyl-CoA carboxylase
 
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Gene: SSP1228: biotin carboxylase subunit of acetyl-CoA carboxylase
 
Macrococcus caseolyticus JCSC5402

Gene: MCCL_1172: biotin carboxylase subunit of acetyl-CoA carboxylase
biotin carboxylase subunit of acetyl-CoA carboxylase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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