Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog DVU2956 - Desulfovibrionales

Properties
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Delta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 9 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Desulfohalobium retbaense DSM 5692
Desulfomicrobium baculatum DSM 4028 9 1
Desulfovibrio desulfuricans G20
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Desulfovibrio magneticus RS-1 9 1
Desulfovibrio piger ATCC 29098
Desulfovibrio salexigens DSM 2638
Desulfovibrio vulgaris Hildenborough 10 1
Desulfovibrio vulgaris str. Miyazaki F 10 2
Lawsonia intracellularis PHE/MN1-00
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
DVU2958
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_2118: TSUP family protein
*
Desulfomicrobium baculatum DSM 4028

Site:
position = -169
score = 6.15979
sequence = GCGGCAATATTTTGCCGT

Site:
position = -348
score = 5.66062
sequence = CCGGCAATTTCTTGCCGG

Gene: Dbac_2264: TSUP family protein
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_0811: TSUP family protein
*
Desulfovibrio magneticus RS-1

Site:
position = -346
score = 6.41255
sequence = GCGGCAAAAATTTGCCGC

Site:
position = -199
score = 5.54573
sequence = GCGGCGAATGTTTGCCGT

Site:
position = -220
score = 6.29425
sequence = ACGGCAAAAATTTGCCGC

Gene: DMR_40120: TSUP family protein
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_00050: TSUP family protein
 
Desulfovibrio salexigens DSM 2638
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -268
score = 5.83669
sequence = GCGGTAATTTTTTGCCGC

Gene: DVU2958: TSUP family protein
*
Desulfovibrio vulgaris str. Miyazaki F

Site:
position = -271
score = 5.44567
sequence = GCGGAAAATTTCTGCCGT

Site:
position = -292
score = 5.66062
sequence = CCGGCAATTTGTTGCCGG

Gene: DvMF_1764: TSUP family protein
 
Lawsonia intracellularis PHE/MN1-00
TSUP family protein
DVU2959
 
Desulfohalobium retbaense DSM 5692

Gene: Dret_2119: hypothetical membrane protein
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_2265: hypothetical membrane protein
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_0812: hypothetical membrane protein
 
Desulfovibrio magneticus RS-1

Gene: DMR_40110: hypothetical membrane protein
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_00049: hypothetical membrane protein
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2959: hypothetical membrane protein
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1765: hypothetical membrane protein
 
Lawsonia intracellularis PHE/MN1-00
hypothetical membrane protein
DVU2960
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_2266: PAS modulated sigma54 specific transcriptional regulator, Fis family
 
Desulfovibrio desulfuricans G20

Gene: Dde_0318: PAS modulated sigma54 specific transcriptional regulator, Fis family
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1

Gene: DMR_40100: PAS modulated sigma54 specific transcriptional regulator, Fis family
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_3504: PAS modulated sigma54 specific transcriptional regulator, Fis family
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2960: PAS modulated sigma54 specific transcriptional regulator, Fis family
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1766: PAS modulated sigma54 specific transcriptional regulator, Fis family
 
Lawsonia intracellularis PHE/MN1-00
PAS modulated sigma54 specific transcriptional regulator, Fis family
DVU2961
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_2267: hypothetical protein
 
Desulfovibrio desulfuricans G20

Gene: Dde_0319: hypothetical protein
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1

Gene: DMR_40090: hypothetical protein
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_3505: hypothetical protein
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2961: hypothetical protein
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1767: hypothetical protein
 
Lawsonia intracellularis PHE/MN1-00
hypothetical protein
DVU2962
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_2268: Signal transduction histidine kinase
 
Desulfovibrio desulfuricans G20

Gene: Dde_0320: Signal transduction histidine kinase
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_0813: Signal transduction histidine kinase
 
Desulfovibrio magneticus RS-1

Gene: DMR_40080: Signal transduction histidine kinase
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_00048: Signal transduction histidine kinase
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_1133: Signal transduction histidine kinase
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2962: Signal transduction histidine kinase
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1768: Signal transduction histidine kinase
 
Lawsonia intracellularis PHE/MN1-00
Signal transduction histidine kinase
DVU2963
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_2269: response regulator receiver protein
 
Desulfovibrio desulfuricans G20

Gene: Dde_0321: response regulator receiver protein
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_0814: response regulator receiver protein
 
Desulfovibrio magneticus RS-1

Gene: DMR_40070: response regulator receiver protein
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_00047: response regulator receiver protein
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2963: response regulator receiver protein
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1769: response regulator receiver protein
 
Lawsonia intracellularis PHE/MN1-00
response regulator receiver protein
DVU2964
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_2270: hypothetical protein
 
Desulfovibrio desulfuricans G20

Gene: Dde_0322: hypothetical protein
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_0815: hypothetical protein
 
Desulfovibrio magneticus RS-1

Gene: DMR_40060: hypothetical protein
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_00046: hypothetical protein
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2964: hypothetical protein
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1770: hypothetical protein
 
Lawsonia intracellularis PHE/MN1-00
hypothetical protein
DVU2965
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2965: hypothetical protein
*
Desulfovibrio vulgaris str. Miyazaki F

Site:
position = -39
score = 5.64787
sequence = GCGGCAACATTCTGCCGC

Gene: DvMF_1771: hypothetical protein
 
Lawsonia intracellularis PHE/MN1-00
hypothetical protein
DVU2966
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_2271: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
 
Desulfovibrio desulfuricans G20

Gene: Dde_0324: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_0816: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
 
Desulfovibrio magneticus RS-1

Gene: DMR_40050: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_00045: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2966: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1772: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
 
Lawsonia intracellularis PHE/MN1-00
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
DVU2967
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_2272: response regulator receiver sensor signal transduction histidine kinase
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_0817: response regulator receiver sensor signal transduction histidine kinase
 
Desulfovibrio magneticus RS-1

Gene: DMR_40040: response regulator receiver sensor signal transduction histidine kinase
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_00044: response regulator receiver sensor signal transduction histidine kinase
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU2967: response regulator receiver sensor signal transduction histidine kinase
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1773: response regulator receiver sensor signal transduction histidine kinase
 
Lawsonia intracellularis PHE/MN1-00
response regulator receiver sensor signal transduction histidine kinase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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