Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog DVU0804 - Desulfovibrionales

Properties
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Delta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 3 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Desulfohalobium retbaense DSM 5692
Desulfomicrobium baculatum DSM 4028
Desulfovibrio desulfuricans G20 2 1
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Desulfovibrio magneticus RS-1
Desulfovibrio piger ATCC 29098
Desulfovibrio salexigens DSM 2638
Desulfovibrio vulgaris Hildenborough 2 1
Desulfovibrio vulgaris str. Miyazaki F 2 1
Lawsonia intracellularis PHE/MN1-00
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
DVU0805
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
*
Desulfovibrio desulfuricans G20

Site:
position = -147
score = 5.89339
sequence = GTAAACTATTTGTTTAC

Gene: Dde_1017: hypothetical protein
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -148
score = 5.55702
sequence = GTAAACTTTTTATTTAC

Gene: DVU0805: hypothetical protein
*
Desulfovibrio vulgaris str. Miyazaki F

Site:
position = -155
score = 4.9626
sequence = GTAATCCGTAATATTAC

Gene: DvMF_2842: hypothetical protein
 
Lawsonia intracellularis PHE/MN1-00
hypothetical protein
DVU0806
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20

Gene: Dde_1018: Chemotaxis protein CheYI, putative
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU0806: Chemotaxis protein CheYI, putative
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_2841: Chemotaxis protein CheYI, putative
 
Lawsonia intracellularis PHE/MN1-00
Chemotaxis protein CheYI, putative
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD