Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog DVU0110 - Desulfovibrionales

Properties
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Delta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 5 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Desulfohalobium retbaense DSM 5692
Desulfomicrobium baculatum DSM 4028
Desulfovibrio desulfuricans G20
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Desulfovibrio magneticus RS-1 5 2
Desulfovibrio piger ATCC 29098 2 1
Desulfovibrio salexigens DSM 2638
Desulfovibrio vulgaris Hildenborough 2 1
Desulfovibrio vulgaris str. Miyazaki F 2 1
Lawsonia intracellularis PHE/MN1-00
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
DMR_16200
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20

Gene: Dde_0218: Methyl-accepting chemotaxis protein
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
*
Desulfovibrio magneticus RS-1

Site:
position = -203
score = 5.3161
sequence = TGTCAAATAAGCTGACA

Gene: DMR_16200: Methyl-accepting chemotaxis protein
 
Desulfovibrio piger ATCC 29098
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_1869: Methyl-accepting chemotaxis protein
 
Desulfovibrio vulgaris Hildenborough
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1214: Methyl-accepting chemotaxis protein
 
Lawsonia intracellularis PHE/MN1-00
Methyl-accepting chemotaxis protein
DMR_16190
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1

Gene: DMR_16190: Two-component sensor histidine kinase
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02520: Two-component sensor histidine kinase
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough

Gene: null: Two-component sensor histidine kinase
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1992: Two-component sensor histidine kinase
 
Lawsonia intracellularis PHE/MN1-00
Two-component sensor histidine kinase
DMR_16180
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
 
Desulfovibrio magneticus RS-1

Gene: DMR_16180: NtrC family two-component response regulator
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02519: NtrC family two-component response regulator
 
Desulfovibrio salexigens DSM 2638
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU0110: NtrC family two-component response regulator
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1993: NtrC family two-component response regulator
 
Lawsonia intracellularis PHE/MN1-00
NtrC family two-component response regulator
 
CRON 2.
DVU0132
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_0315: TSUP family protein
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_0357: TSUP family protein
*
Desulfovibrio magneticus RS-1

Site:
position = -528
score = 5.3161
sequence = TGTAAAAAAAGCTGACA

Gene: DMR_16160: TSUP family protein
*
Desulfovibrio piger ATCC 29098

Site:
position = -164
score = 5.3161
sequence = TGTAAAAAAAGCTGACA

Gene: DESPIG_02269: TSUP family protein
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_2192: TSUP family protein
*
Desulfovibrio vulgaris Hildenborough

Site:
position = -442
score = 5.3161
sequence = TGTAAAAAAAGCTGACA

Gene: DVU0132: TSUP family protein
*
Desulfovibrio vulgaris str. Miyazaki F

Site:
position = -465
score = 4.91481
sequence = CGTAAAAAAAGCTGACA

Gene: DvMF_1984: TSUP family protein
 
Lawsonia intracellularis PHE/MN1-00
TSUP family protein
DVU0133
 
Desulfohalobium retbaense DSM 5692
 
Desulfomicrobium baculatum DSM 4028

Gene: Dbac_0316: hypothetical membrane protein
 
Desulfovibrio desulfuricans G20
 
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Gene: Ddes_0356: hypothetical membrane protein
 
Desulfovibrio magneticus RS-1

Gene: DMR_16150: hypothetical membrane protein
 
Desulfovibrio piger ATCC 29098

Gene: DESPIG_02268: hypothetical membrane protein
 
Desulfovibrio salexigens DSM 2638

Gene: Desal_2191: hypothetical membrane protein
 
Desulfovibrio vulgaris Hildenborough

Gene: DVU0133: hypothetical membrane protein
 
Desulfovibrio vulgaris str. Miyazaki F

Gene: DvMF_1985: hypothetical membrane protein
 
Lawsonia intracellularis PHE/MN1-00
hypothetical membrane protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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