Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Bcep18194_A4479 - Burkholderia

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 2 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Burkholderia cepacia AMMD
Burkholderia glumae BGR1
Burkholderia mallei ATCC 23344
Burkholderia phymatum STM815
Burkholderia pseudomallei K96243
Burkholderia sp. 383 2 2
Burkholderia vietnamiensis G4
Burkholderia xenovorans LB400
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
COG-RimI
 
Burkholderia cepacia AMMD

Gene: Bamb_5170: GCN5-related N-acetyltransferase
 
Burkholderia glumae BGR1
 
Burkholderia mallei ATCC 23344
 
Burkholderia phymatum STM815
 
Burkholderia pseudomallei K96243
*
Burkholderia sp. 383

Site:
position = -65
score = 7.73075
sequence = GTCTGTGCCGGT-(13)-AATTGTGCAGGT

Gene: Bcep18194_B2804: GCN5-related N-acetyltransferase
 
Burkholderia vietnamiensis G4
 
Burkholderia xenovorans LB400
GCN5-related N-acetyltransferase
 
CRON 2.
COG436 (PF00155)
 
Burkholderia cepacia AMMD
 
Burkholderia glumae BGR1
 
Burkholderia mallei ATCC 23344
 
Burkholderia phymatum STM815
 
Burkholderia pseudomallei K96243
*
Burkholderia sp. 383

Site:
position = -106
score = 9.15178
sequence = AATTGTGTCGGT-(13)-AATTGTGGCTGT

Gene: Bcep18194_A4480: Aspartate/tyrosine/aromatic aminotransferase
 
Burkholderia vietnamiensis G4
 
Burkholderia xenovorans LB400
Aspartate/tyrosine/aromatic aminotransferase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD