Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog AcnR - Mycobacteriaceae

Properties
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode:
Biological process: Tricarboxylic acid cycle
Effector: Citrate
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 15 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Mycobacterium abscessus ATCC 19977 3 2
Mycobacterium avium 104 3 2
Mycobacterium flavescens PYR-GCK 3 2
Mycobacterium leprae TN 1 1
Mycobacterium marinum M 2 1
Mycobacterium smegmatis str. MC2 155 3 2
Mycobacterium sp. JLS 3 2
Mycobacterium tuberculosis H37Rv 2 1
Mycobacterium vanbaalenii PYR-1 3 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
aceA
*
Mycobacterium abscessus ATCC 19977

Site:
position = -259
score = 5.29545
sequence = CAGTACGAGCGTTCTG

Gene: MAB_4095c: Isocitrate lyase (EC 4.1.3.1)
*
Mycobacterium avium 104

Site:
position = -268
score = 5.19499
sequence = CAGTACAAGCGTCCGG

Gene: MAV_4682: Isocitrate lyase (EC 4.1.3.1)
*
Mycobacterium flavescens PYR-GCK

Site:
position = -266
score = 5.29545
sequence = CAGTACGGGCGTACTG

Gene: Mflv_0107: Isocitrate lyase (EC 4.1.3.1)
 
Mycobacterium leprae TN
 
Mycobacterium marinum M

Gene: MMAR_0792: Isocitrate lyase (EC 4.1.3.1)
*
Mycobacterium smegmatis str. MC2 155

Site:
position = -233
score = 5.29545
sequence = CAGTACGGGCGTACTG

Gene: MSMEG_0911: Isocitrate lyase (EC 4.1.3.1)
*
Mycobacterium sp. JLS

Site:
position = -252
score = 5.29545
sequence = CAGTACGGGCGTACTG

Gene: Mjls_0629: Isocitrate lyase (EC 4.1.3.1)
 
Mycobacterium tuberculosis H37Rv

Gene: Rv0467: Isocitrate lyase (EC 4.1.3.1)
*
Mycobacterium vanbaalenii PYR-1

Site:
position = -251
score = 5.78986
sequence = CAGTACAAGCGTACTG

Gene: Mvan_0801: Isocitrate lyase (EC 4.1.3.1)
Isocitrate lyase (EC 4.1.3.1)
 
CRON 2.
acnA
*
Mycobacterium abscessus ATCC 19977

Site:
position = -44
score = 5.42278
sequence = CGGGACAAGCGTACTG

Gene: MAB_2730: Aconitate hydratase (EC 4.2.1.3)
*
Mycobacterium avium 104

Site:
position = -79
score = 5.78986
sequence = CAGGACAAGCGTACTG

Gene: MAV_3303: Aconitate hydratase (EC 4.2.1.3)
*
Mycobacterium flavescens PYR-GCK

Site:
position = -77
score = 5.78986
sequence = CAGGACAAGCGTACTG

Gene: Mflv_3665: Aconitate hydratase (EC 4.2.1.3)
*
Mycobacterium leprae TN

Site:
position = -80
score = 5.78986
sequence = CAGGACAAGCGTACTG

Gene: ML1814: Aconitate hydratase (EC 4.2.1.3)
*
Mycobacterium marinum M

Site:
position = -109
score = 5.78986
sequence = CAGGACAAGCGTACTG

Gene: MMAR_2282: Aconitate hydratase (EC 4.2.1.3)
*
Mycobacterium smegmatis str. MC2 155

Site:
position = -74
score = 5.78986
sequence = CAGGACAAGCGTACTG

Gene: MSMEG_3143: Aconitate hydratase (EC 4.2.1.3)
*
Mycobacterium sp. JLS

Site:
position = -74
score = 5.55285
sequence = CAGGACAAACGTACTG

Gene: Mjls_2486: Aconitate hydratase (EC 4.2.1.3)
*
Mycobacterium tuberculosis H37Rv

Site:
position = -80
score = 5.78986
sequence = CAGGACAAGCGTACTG

Gene: Rv1475c: Aconitate hydratase (EC 4.2.1.3)
*
Mycobacterium vanbaalenii PYR-1

Site:
position = -78
score = 5.42278
sequence = CAGGACAAGCGTACCG

Gene: Mvan_2745: Aconitate hydratase (EC 4.2.1.3)
Aconitate hydratase (EC 4.2.1.3)
acnR
 
Mycobacterium abscessus ATCC 19977

Gene: MAB_2731: Aconitase gene transcriptional regulator AcnR, TetR family
 
Mycobacterium avium 104

Gene: MAV_3305: Aconitase gene transcriptional regulator AcnR, TetR family
 
Mycobacterium flavescens PYR-GCK

Gene: Mflv_3666: Aconitase gene transcriptional regulator AcnR, TetR family
 
Mycobacterium leprae TN
 
Mycobacterium marinum M

Gene: MMAR_2281: Aconitase gene transcriptional regulator AcnR, TetR family
 
Mycobacterium smegmatis str. MC2 155

Gene: MSMEG_3142: Aconitase gene transcriptional regulator AcnR, TetR family
 
Mycobacterium sp. JLS

Gene: Mjls_2485: Aconitase gene transcriptional regulator AcnR, TetR family
 
Mycobacterium tuberculosis H37Rv

Gene: Rv1474c: Aconitase gene transcriptional regulator AcnR, TetR family
 
Mycobacterium vanbaalenii PYR-1

Gene: Mvan_2744: Aconitase gene transcriptional regulator AcnR, TetR family
Aconitase gene transcriptional regulator AcnR, TetR family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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