Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog CsoR - Listeriaceae

Properties
Regulator type: Transcription factor
Regulator family: CsoR
Regulation mode: repressor
Biological process: Copper resistance
Effector: Copper ion, (Cu+)
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 4 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Listeria monocytogenes EGD-e 3 1
Listeria seeligeri serovar 1/2b str. SLCC3954 3 1
Listeria welshimeri serovar 6b str. SLCC5334 3 1
Listeria innocua Clip11262 3 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
csoR
*
Listeria monocytogenes EGD-e

Site:
position = -50
score = 7.14143
sequence = ATACCTATAGGGGGTAT

Gene: lmo1854: Copper-sensing transcriptional repressor
*
Listeria seeligeri serovar 1/2b str. SLCC3954

Site:
position = -50
score = 7.14143
sequence = ATACCTATAGGGGGTAT

Gene: lse_1834: Copper-sensing transcriptional repressor
*
Listeria welshimeri serovar 6b str. SLCC5334

Site:
position = -50
score = 7.14143
sequence = ATACCTATAGGGGGTAT

Gene: lwe1873: Copper-sensing transcriptional repressor
*
Listeria innocua Clip11262

Site:
position = -50
score = 7.14143
sequence = ATACCTATAGGGGGTAT

Gene: lin1968: Copper-sensing transcriptional repressor
Copper-sensing transcriptional repressor
copA
 
Listeria monocytogenes EGD-e

Gene: lmo1853: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Listeria seeligeri serovar 1/2b str. SLCC3954

Gene: lse_1833: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Listeria welshimeri serovar 6b str. SLCC5334

Gene: lwe1872: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Listeria innocua Clip11262

Gene: lin1967: Copper-translocating P-type ATPase (EC 3.6.3.4)
Copper-translocating P-type ATPase (EC 3.6.3.4)
copZ
 
Listeria monocytogenes EGD-e

Gene: lmo1852: Copper chaperone
 
Listeria seeligeri serovar 1/2b str. SLCC3954

Gene: lse_1832: Copper chaperone
 
Listeria welshimeri serovar 6b str. SLCC5334

Gene: lwe1871: Copper chaperone
 
Listeria innocua Clip11262

Gene: lin1966: Copper chaperone
Copper chaperone
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD