Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog DasR - Frankineae/Propionibacterineae/Pseudonocardiaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: N-acetylglucosamine utilization
Effector: Glucosamine-6-phosphate
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 57 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Acidothermus cellulolyticus 11B 14 9
Frankia sp. CcI3
Frankia sp. EAN1pec
Nakamurella multipartita DSM 44233 5 2
Nocardioides sp. JS614 1 1
Propionibacterium acnes KPA171202 4 3
Actinosynnema mirum DSM 43827 25 15
Saccharomonospora viridis DSM 43017 9 5
Saccharopolyspora erythraea NRRL 2338 18 13
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
dasR
*
Acidothermus cellulolyticus 11B

Site:
position = -312
score = 4.78441
sequence = GTTGGCATAGACCACC

Site:
position = -334
score = 5.68801
sequence = ATTGGTTTAGACCAAT

Gene: Acel_0551: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
*
Nakamurella multipartita DSM 44233

Site:
position = -47
score = 4.91924
sequence = ATTGGCGTAGACCATT

Gene: Namu_0953: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
 
Nocardioides sp. JS614

Gene: Noca_3959: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
*
Propionibacterium acnes KPA171202

Site:
position = -140
score = 4.9451
sequence = GGTGGTATGGACCACT

Gene: PPA0676: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
*
Actinosynnema mirum DSM 43827

Site:
position = -173
score = 5.58276
sequence = AGTGGTGTAGACCAAT

Gene: Amir_0404: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
*
Saccharomonospora viridis DSM 43017

Site:
position = -94
score = 5.12218
sequence = ACCGGTCTAGACCATT

Gene: Svir_34690: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
 
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_0500: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
nagF
 
Acidothermus cellulolyticus 11B
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
*2
Propionibacterium acnes KPA171202

Site:
position = -89
score = 4.84426
sequence = AGTTGTCTGGACCACT

Gene: PPA0678: PTS system N-acetylglucosamine-specific EIIB component

Gene: PPA0677: PTS system N-acetylglucosamine-specific EIIB component
*
Actinosynnema mirum DSM 43827

Site:
position = -126
score = 5.08587
sequence = TCCGGTCTAGACCAGT

Gene: Amir_5258: PTS system N-acetylglucosamine-specific EIIB component
*
Saccharomonospora viridis DSM 43017

Site:
position = -121
score = 5.1515
sequence = TCCGGTCTAGACCACT

Gene: Svir_15400: PTS system N-acetylglucosamine-specific EIIB component
*
Saccharopolyspora erythraea NRRL 2338

Site:
position = -159
score = 4.71205
sequence = TCCGGTCTAAACCAGT

Gene: SACE_2061: PTS system N-acetylglucosamine-specific EIIB component
PTS system N-acetylglucosamine-specific EIIB component
nagG
 
Acidothermus cellulolyticus 11B
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202

Gene: PPA0679: PTS system N-acetylglucosamine-specific EIIA component
 
Actinosynnema mirum DSM 43827

Gene: Amir_5257: PTS system N-acetylglucosamine-specific EIIA component
 
Saccharomonospora viridis DSM 43017

Gene: Svir_15410: PTS system N-acetylglucosamine-specific EIIA component
 
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_2062: PTS system N-acetylglucosamine-specific EIIA component
PTS system N-acetylglucosamine-specific EIIA component
 
CRON 2.
glcI
 
Acidothermus cellulolyticus 11B
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
*
Actinosynnema mirum DSM 43827

Site:
position = -167
score = 4.57896
sequence = AGAGGTCTAGTCCACC

Gene: Amir_4031: Glucan endo-1,3-beta-glucosidase
 
Saccharomonospora viridis DSM 43017
 
Saccharopolyspora erythraea NRRL 2338
Glucan endo-1,3-beta-glucosidase
 
CRON 3.
chb
 
Acidothermus cellulolyticus 11B
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
*2
Actinosynnema mirum DSM 43827

Site:
position = -157
score = 5.05
sequence = TATGGTCTAGACCAAG

Gene: Amir_5334: Chitin binding protein

Site:
position = -122
score = 4.67269
sequence = TATGGTCTAGACCGGC

Gene: Amir_5107: Chitin binding protein
 
Saccharomonospora viridis DSM 43017
*
Saccharopolyspora erythraea NRRL 2338

Site:
position = -143
score = 4.70486
sequence = GTTGGACTGGACCAAA

Site:
position = -121
score = 4.6612
sequence = CATGGTCTGGACCAAA

Gene: SACE_0110: Chitin binding protein
Chitin binding protein
Amir_5333
 
Acidothermus cellulolyticus 11B
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
 
Actinosynnema mirum DSM 43827

Gene: Amir_5333: putative lipoprotein
 
Saccharomonospora viridis DSM 43017
 
Saccharopolyspora erythraea NRRL 2338
putative lipoprotein
 
CRON 4.
Acel_1459
*
Acidothermus cellulolyticus 11B

Site:
position = -142
score = 4.30004
sequence = CCTGGTCTAGTCCTCT

Gene: Acel_1459: Exochitinase 1 precursor (EC 3.2.1.14)
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
 
Actinosynnema mirum DSM 43827
 
Saccharomonospora viridis DSM 43017
 
Saccharopolyspora erythraea NRRL 2338
Exochitinase 1 precursor (EC 3.2.1.14)
chiA
 
Acidothermus cellulolyticus 11B

Gene: Acel_1458: Chitinase A precursor (EC 3.2.1.14)
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
*
Actinosynnema mirum DSM 43827

Site:
position = -80
score = 5.4379
sequence = ATTGGTCTAGTCCACT

Gene: Amir_1220: Chitinase A precursor (EC 3.2.1.14)
 
Saccharomonospora viridis DSM 43017
*
Saccharopolyspora erythraea NRRL 2338

Site:
position = -71
score = 5.08886
sequence = AGTGGTCTAGTCCATT

Gene: SACE_5394: Chitinase A precursor (EC 3.2.1.14)
Chitinase A precursor (EC 3.2.1.14)
 
CRON 5.
dasA
*
Acidothermus cellulolyticus 11B

Site:
position = -64
score = 5.68801
sequence = ATTGGTCTAAACCAAT

Site:
position = -86
score = 4.78441
sequence = GGTGGTCTATGCCAAC

Gene: Acel_0552: sugar transporter sugar binding protein
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
*
Actinosynnema mirum DSM 43827

Site:
position = -87
score = 5.58276
sequence = ATTGGTCTACACCACT

Gene: Amir_0403: sugar transporter sugar binding protein
 
Saccharomonospora viridis DSM 43017
 
Saccharopolyspora erythraea NRRL 2338
sugar transporter sugar binding protein
dasB
 
Acidothermus cellulolyticus 11B

Gene: Acel_0553: sugar transporter integral membrane protein
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
 
Actinosynnema mirum DSM 43827

Gene: Amir_0402: sugar transporter integral membrane protein
 
Saccharomonospora viridis DSM 43017
 
Saccharopolyspora erythraea NRRL 2338
sugar transporter integral membrane protein
dasC
 
Acidothermus cellulolyticus 11B

Gene: Acel_0554: sugar transporter inner membrane protein
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
 
Actinosynnema mirum DSM 43827

Gene: Amir_0401: sugar transporter inner membrane protein
 
Saccharomonospora viridis DSM 43017
 
Saccharopolyspora erythraea NRRL 2338
sugar transporter inner membrane protein
nagK
*2
Acidothermus cellulolyticus 11B

Gene: Acel_0555: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)

Site:
position = -94
score = 4.86563
sequence = ATCGGTACAGACCACT

Gene: Acel_1854: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202

Gene: PPA1986: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
 
Actinosynnema mirum DSM 43827
 
Saccharomonospora viridis DSM 43017
 
Saccharopolyspora erythraea NRRL 2338
N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
nagB2
 
Acidothermus cellulolyticus 11B

Gene: Acel_0556: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
 
Actinosynnema mirum DSM 43827
 
Saccharomonospora viridis DSM 43017
 
Saccharopolyspora erythraea NRRL 2338
Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
 
CRON 6.
chiC
 
Acidothermus cellulolyticus 11B
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
*
Actinosynnema mirum DSM 43827

Site:
position = -80
score = 4.64055
sequence = AGTGGTCTAGACCTTG

Site:
position = -57
score = 4.87423
sequence = AGTGGTCTGAACCACA

Gene: Amir_6206: Chitinase (EC 3.2.1.14)
 
Saccharomonospora viridis DSM 43017
*2
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_6557: Chitinase (EC 3.2.1.14)

Site:
position = -172
score = 4.63937
sequence = GGTGGTCTAGACCTTA

Gene: SACE_6558: Chitinase (EC 3.2.1.14)
Chitinase (EC 3.2.1.14)
 
CRON 7.
COG3179
 
Acidothermus cellulolyticus 11B
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
*
Actinosynnema mirum DSM 43827

Site:
position = -75
score = 5.51713
sequence = ACTGGTGTAGACCAAT

Gene: Amir_5336: Predicted chitinase
 
Saccharomonospora viridis DSM 43017
 
Saccharopolyspora erythraea NRRL 2338
Predicted chitinase
 
CRON 8.
glmS
 
Acidothermus cellulolyticus 11B

Gene: Acel_0344: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
 
Frankia sp. CcI3

Gene: Francci3_0617: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
 
Frankia sp. EAN1pec

Gene: Franean1_6015: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
 
Nakamurella multipartita DSM 44233

Gene: Namu_1187: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
 2
Nocardioides sp. JS614

Gene: Noca_4602: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)

Gene: Noca_0896: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
 
Propionibacterium acnes KPA171202

Gene: PPA1794: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
*
Actinosynnema mirum DSM 43827

Site:
position = -91
score = 5.47353
sequence = ATTGGTCTACACCAAA

Gene: Amir_6558: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
 
Saccharomonospora viridis DSM 43017

Gene: Svir_04560: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
*
Saccharopolyspora erythraea NRRL 2338

Site:
position = -38
score = 4.53167
sequence = GGAGGTATGGACCAAT

Gene: SACE_6768: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
 
CRON 9.
nagB2
 
Acidothermus cellulolyticus 11B
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
*
Actinosynnema mirum DSM 43827

Site:
position = -63
score = 5.32867
sequence = ATTGGTCTAGACCTAA

Gene: Amir_0400: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
*
Saccharomonospora viridis DSM 43017

Site:
position = -31
score = 5.12218
sequence = AATGGTCTAGACCGGT

Gene: Svir_34700: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
*
Saccharopolyspora erythraea NRRL 2338

Site:
position = -34
score = 4.92397
sequence = ATTGGTCTAGACCTGG

Gene: SACE_0498: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
nagK
 
Acidothermus cellulolyticus 11B
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
 
Actinosynnema mirum DSM 43827

Gene: Amir_0391: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
 
Saccharomonospora viridis DSM 43017

Gene: Svir_34710: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
 
Saccharopolyspora erythraea NRRL 2338
N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
 
CRON 10.
chiB
*2
Acidothermus cellulolyticus 11B

Site:
position = -43
score = 5.53685
sequence = ATTGGTCTAGGCCACT

Site:
position = -65
score = 5.02447
sequence = ATTGGACTAGTCCAAT

Gene: Acel_1460: Chitinase (EC 3.2.1.14)

Site:
position = -80
score = 4.80997
sequence = ATTGGTCTTGACCTAT

Site:
position = -66
score = 5.6421
sequence = ATTGGTCTAGGCCAAT

Gene: Acel_0603: Chitinase (EC 3.2.1.14)
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
 
Actinosynnema mirum DSM 43827
 
Saccharomonospora viridis DSM 43017
 
Saccharopolyspora erythraea NRRL 2338
Chitinase (EC 3.2.1.14)
 
CRON 11.
nagE
 
Acidothermus cellulolyticus 11B
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
*
Nakamurella multipartita DSM 44233

Site:
position = -169
score = 5.35968
sequence = ATTGGTCTATGCCAAT

Site:
position = -140
score = 5.5444
sequence = GTTGGTCTATACCAAT

Gene: Namu_0958: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
 
Nocardioides sp. JS614
*
Propionibacterium acnes KPA171202

Site:
position = -51
score = 4.9451
sequence = AGTGGTCCATACCACC

Gene: PPA0675: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
 
Actinosynnema mirum DSM 43827

Gene: Amir_5260: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
 
Saccharomonospora viridis DSM 43017

Gene: Svir_15380: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
 
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_2059: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
Namu_0959
 
Acidothermus cellulolyticus 11B
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233

Gene: Namu_0959: hypothetical protein
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
 
Actinosynnema mirum DSM 43827
 
Saccharomonospora viridis DSM 43017
 
Saccharopolyspora erythraea NRRL 2338
hypothetical protein
nagB
 
Acidothermus cellulolyticus 11B
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233

Gene: Namu_0960: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
 
Nocardioides sp. JS614

Gene: Noca_4483: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
 
Propionibacterium acnes KPA171202
 
Actinosynnema mirum DSM 43827
 
Saccharomonospora viridis DSM 43017
 
Saccharopolyspora erythraea NRRL 2338
Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
nagA
*
Acidothermus cellulolyticus 11B

Site:
position = -183
score = 5.10951
sequence = TATGGTCTGGACCAAT

Site:
position = -141
score = 5.22342
sequence = ATTGGTCTAGTCCACA

Gene: Acel_0557: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec

Gene: Franean1_4198: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Nakamurella multipartita DSM 44233

Gene: Namu_0961: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202

Gene: PPA0484: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Actinosynnema mirum DSM 43827

Gene: Amir_6924: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
*
Saccharomonospora viridis DSM 43017

Site:
position = -21
score = 5.28768
sequence = TCTGGTCTGGACCAAT

Gene: Svir_38290: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_7184: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
dasR2
 
Acidothermus cellulolyticus 11B
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
*
Actinosynnema mirum DSM 43827

Site:
position = -63
score = 5.08587
sequence = ACTGGTCTAGACCGGA

Gene: Amir_5259: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
*
Saccharomonospora viridis DSM 43017

Site:
position = -60
score = 5.1515
sequence = AGTGGTCTAGACCGGA

Gene: Svir_15390: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
*
Saccharopolyspora erythraea NRRL 2338

Site:
position = -124
score = 4.71205
sequence = ACTGGTTTAGACCGGA

Gene: SACE_2060: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
ptsH
 
Acidothermus cellulolyticus 11B
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
 
Actinosynnema mirum DSM 43827

Gene: Amir_5261: Phosphotransferase system, phosphocarrier protein HPr
 
Saccharomonospora viridis DSM 43017

Gene: Svir_15370: Phosphotransferase system, phosphocarrier protein HPr
 
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_2058: Phosphotransferase system, phosphocarrier protein HPr
Phosphotransferase system, phosphocarrier protein HPr
nagK2
 
Acidothermus cellulolyticus 11B
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
*
Actinosynnema mirum DSM 43827

Site:
position = -63
score = 5.3311
sequence = CTTGGTATAGACCAAT

Gene: Amir_6923: Predicted N-acetylglucosamine kinase, glucokinase-like (EC 2.7.1.59)
 
Saccharomonospora viridis DSM 43017

Gene: Svir_16630: Predicted N-acetylglucosamine kinase, glucokinase-like (EC 2.7.1.59)
*
Saccharopolyspora erythraea NRRL 2338

Site:
position = -43
score = 5.34775
sequence = GTTGGTGTAGACCACT

Gene: SACE_7183: Predicted N-acetylglucosamine kinase, glucokinase-like (EC 2.7.1.59)
Predicted N-acetylglucosamine kinase, glucokinase-like (EC 2.7.1.59)
 
CRON 12.
nagT
 
Acidothermus cellulolyticus 11B
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
*
Actinosynnema mirum DSM 43827

Site:
position = -100
score = 4.92278
sequence = TCTGGTCTAGACCTAC

Gene: Amir_0446: N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein
 
Saccharomonospora viridis DSM 43017
 
Saccharopolyspora erythraea NRRL 2338
N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein
nagU
 
Acidothermus cellulolyticus 11B
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
 
Actinosynnema mirum DSM 43827

Gene: Amir_0447: N-Acetyl-D-glucosamine ABC transport system, permease protein 1
 
Saccharomonospora viridis DSM 43017
 
Saccharopolyspora erythraea NRRL 2338
N-Acetyl-D-glucosamine ABC transport system, permease protein 1
nagV
 
Acidothermus cellulolyticus 11B
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
 
Actinosynnema mirum DSM 43827

Gene: Amir_0448: N-Acetyl-D-glucosamine ABC transport system, permease protein 2
 
Saccharomonospora viridis DSM 43017
 
Saccharopolyspora erythraea NRRL 2338
N-Acetyl-D-glucosamine ABC transport system, permease protein 2
hex
*
Acidothermus cellulolyticus 11B

Site:
position = -61
score = 4.67543
sequence = AAAGGTCTAGACCTAT

Gene: Acel_0128: Beta-hexosaminidase (EC 3.2.1.52)
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614

Gene: Noca_4486: Beta-hexosaminidase (EC 3.2.1.52)
 
Propionibacterium acnes KPA171202
*2
Actinosynnema mirum DSM 43827

Site:
position = -41
score = 4.357
sequence = ATTGGTCCAGACCTTG

Gene: Amir_1091: Beta-hexosaminidase (EC 3.2.1.52)

Gene: Amir_0449: Beta-hexosaminidase (EC 3.2.1.52)
 
Saccharomonospora viridis DSM 43017
*
Saccharopolyspora erythraea NRRL 2338

Site:
position = -51
score = 4.69721
sequence = TTTGGTCTATACCTTT

Gene: SACE_3851: Beta-hexosaminidase (EC 3.2.1.52)
Beta-hexosaminidase (EC 3.2.1.52)
 
CRON 13.
chiB
 
Acidothermus cellulolyticus 11B
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
 
Actinosynnema mirum DSM 43827
 
Saccharomonospora viridis DSM 43017
*
Saccharopolyspora erythraea NRRL 2338

Site:
position = -104
score = 4.41651
sequence = ATTGGACCGGACCATT

Site:
position = -77
score = 4.70884
sequence = GGTGGTCCAGTCCACT

Gene: SACE_2232: Chitinase (EC 3.2.1.14)
Chitinase (EC 3.2.1.14)
 
CRON 14.
ptsI
 
Acidothermus cellulolyticus 11B
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
 
Actinosynnema mirum DSM 43827
 
Saccharomonospora viridis DSM 43017
*
Saccharopolyspora erythraea NRRL 2338

Site:
position = -13
score = 4.70096
sequence = TATGGTCTAGACCATG

Gene: SACE_7368: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
 
CRON 15.
Noca_0732
 
Acidothermus cellulolyticus 11B
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
*
Nocardioides sp. JS614

Site:
position = -27
score = 5.13726
sequence = GCTGGTCTAGACCTAT

Gene: Noca_0732: N-acetylmuramoyl-L-alanine amidase, major autolysin [EC:3.5.1.28] [KO:K01448]
 
Propionibacterium acnes KPA171202
 
Actinosynnema mirum DSM 43827
 
Saccharomonospora viridis DSM 43017
 
Saccharopolyspora erythraea NRRL 2338
N-acetylmuramoyl-L-alanine amidase, major autolysin [EC:3.5.1.28] [KO:K01448]
 
CRON 16.
chi
*
Acidothermus cellulolyticus 11B

Site:
position = -174
score = 5.30814
sequence = GTTGGTCTAGTCCAAT

Gene: Acel_2033: Chitinase (EC 3.2.1.14)
 
Frankia sp. CcI3
 
Frankia sp. EAN1pec
 
Nakamurella multipartita DSM 44233
 
Nocardioides sp. JS614
 
Propionibacterium acnes KPA171202
 
Actinosynnema mirum DSM 43827
 
Saccharomonospora viridis DSM 43017
*3
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_5287: Chitinase (EC 3.2.1.14)

Site:
position = -68
score = 5.28768
sequence = ACTGGTCTGGACCAAA

Gene: SACE_3887: Chitinase (EC 3.2.1.14)

Site:
position = -99
score = 4.67653
sequence = GGTGGTACAAACCAAT

Gene: SACE_1076: Chitinase (EC 3.2.1.14)
Chitinase (EC 3.2.1.14)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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