Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog DasR - Nocardiaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: N-acetylglucosamine utilization
Effector: Glucosamine-6-phosphate
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 6 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Nocardia farcinica IFM 10152
Rhodococcus erythropolis PR4 8 2
Rhodococcus opacus B4 8 2
Rhodococcus sp. RHA1 7 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nagE_B
 
Nocardia farcinica IFM 10152
*
Rhodococcus erythropolis PR4

Site:
position = -155
score = 5.87734
sequence = TCCGGTCATAACCAGT

Gene: RER_39620: PTS system, N-acetylglucosamine-specific IIB component
*
Rhodococcus opacus B4

Site:
position = -123
score = 5.87734
sequence = TCCGGTCATAACCAGT

Gene: ROP_12540: PTS system, N-acetylglucosamine-specific IIB component
*
Rhodococcus sp. RHA1

Site:
position = -31
score = 5.87734
sequence = TCCGGTCATAACCAGT

Gene: RHA1_ro01551: PTS system, N-acetylglucosamine-specific IIB component
PTS system, N-acetylglucosamine-specific IIB component
nagE_A
 
Nocardia farcinica IFM 10152
 
Rhodococcus erythropolis PR4

Gene: RER_39630: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)
 
Rhodococcus opacus B4

Gene: ROP_12550: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)
 
Rhodococcus sp. RHA1

Gene: RHA1_ro01552: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)
PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69)
 
CRON 2.
nagE
 
Nocardia farcinica IFM 10152
*
Rhodococcus erythropolis PR4

Site:
position = -188
score = 5.87734
sequence = ACTGGTTATGACCGGA

Gene: RER_39610: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
*
Rhodococcus opacus B4

Site:
position = -140
score = 5.87734
sequence = ACTGGTTATGACCGGA

Gene: ROP_12530: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
*
Rhodococcus sp. RHA1

Site:
position = -176
score = 5.87734
sequence = ACTGGTTATGACCGGA

Gene: RHA1_ro01550: PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
ptsH
 
Nocardia farcinica IFM 10152
 
Rhodococcus erythropolis PR4

Gene: RER_39600: Phosphotransferase system, phosphocarrier protein HPr
 
Rhodococcus opacus B4

Gene: ROP_12520: Phosphotransferase system, phosphocarrier protein HPr
 
Rhodococcus sp. RHA1
Phosphotransferase system, phosphocarrier protein HPr
ptsI
 
Nocardia farcinica IFM 10152
 
Rhodococcus erythropolis PR4

Gene: RER_39590: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
 
Rhodococcus opacus B4

Gene: ROP_12510: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
 
Rhodococcus sp. RHA1

Gene: RHA1_ro01549: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
nagA
 
Nocardia farcinica IFM 10152
 
Rhodococcus erythropolis PR4

Gene: RER_39580: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Rhodococcus opacus B4

Gene: ROP_12500: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
 
Rhodococcus sp. RHA1

Gene: RHA1_ro01548: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
nagB
 
Nocardia farcinica IFM 10152
 
Rhodococcus erythropolis PR4

Gene: RER_39570: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
 
Rhodococcus opacus B4

Gene: ROP_12490: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
 
Rhodococcus sp. RHA1

Gene: RHA1_ro01547: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
cutC
 
Nocardia farcinica IFM 10152
 
Rhodococcus erythropolis PR4

Gene: RER_39560: Cytoplasmic copper homeostasis protein cutC
 
Rhodococcus opacus B4

Gene: ROP_12480: Cytoplasmic copper homeostasis protein cutC
 
Rhodococcus sp. RHA1

Gene: RHA1_ro01546: Cytoplasmic copper homeostasis protein cutC
Cytoplasmic copper homeostasis protein cutC
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD