Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog FixJ - Caulobacterales

Properties
Regulator type: Transcription factor
Regulator family: LuxR
Regulation mode: activator
Biological process: Oxidative stress response
Effector: Oxygen
Phylum: Proteobacteria/alpha
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Caulobacter crescentus CB15 1 1
Caulobacter segnis ATCC 21756 1 1
Caulobacter sp. K31 1 1
Phenylobacterium zucineum HLK1 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
fixK
*
Caulobacter crescentus CB15

Site:
position = -116
score = 4.4181
sequence = CTCAGCATCGCCGCCTAA

Site:
position = -102
score = 3.90824
sequence = CTAAGGGACTCCCCTTAG

Site:
position = -73
score = 5.20096
sequence = TTAGGCGCATGCCCCGAA

Gene: CC0752: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family
*
Caulobacter segnis ATCC 21756

Site:
position = -70
score = 5.35768
sequence = TTAGGCGGCCCCCCCGAA

Site:
position = -112
score = 4.55304
sequence = TAAAGGGGCGGCGCATAA

Gene: Cseg_3612: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family
*3
Caulobacter sp. K31

Gene: Caul_2975: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family

Gene: Caul_2457: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family

Site:
position = -76
score = 4.57087
sequence = TTAGGCGTCGGTCCCGAC

Gene: Caul_0629: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family
*2
Phenylobacterium zucineum HLK1

Site:
position = -87
score = 4.30329
sequence = TTAGGTGCGACCCCTTAG

Site:
position = -73
score = 4.78053
sequence = TTAGGGGGACGCCACGAA

Gene: PHZ_c2798: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family

Gene: PHZ_p0186: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family
Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD