Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Rex - Micrococcineae

Properties
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 25 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Clavibacter michiganensis subsp. michiganensis NCPPB 382
Brevibacterium linens BL2 3 3
Brachybacterium faecium DSM 4810
Beutenbergia cavernae DSM 12333
Arthrobacter sp. FB24 7 5
Arthrobacter chlorophenolicus A6 7 5
Arthrobacter aurescens TC1 7 5
Janibacter sp. HTCC2649 27 3
Jonesia denitrificans DSM 20603
Kocuria rhizophila DC2201
Tropheryma whipplei str. Twist
Renibacterium salmoninarum ATCC 33209 6 4
Leifsonia xyli subsp. xyli str. CTCB07
Kytococcus sedentarius DSM 20547
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
whiB
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
*
Brevibacterium linens BL2

Site:
position = -129
score = 4.27921
sequence = TTGTCAGAAATTTCACAC

Gene: BlinB01003060: WhiB-family transcriptional regulator involved in differentiation and sporulation
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333
*
Arthrobacter sp. FB24

Site:
position = -60
score = 6.01789
sequence = TAGTGAATATTTTCACAA

Gene: Arth_2697: WhiB-family transcriptional regulator involved in differentiation and sporulation
*
Arthrobacter chlorophenolicus A6

Site:
position = -52
score = 5.77903
sequence = TAGTGAATAATTTCACAA

Gene: Achl_2428: WhiB-family transcriptional regulator involved in differentiation and sporulation
*
Arthrobacter aurescens TC1

Site:
position = -58
score = 5.9437
sequence = TCGTGAATGTTTTCACAA

Gene: AAur_2682: WhiB-family transcriptional regulator involved in differentiation and sporulation
 
Janibacter sp. HTCC2649

Gene: JNB_19038: WhiB-family transcriptional regulator involved in differentiation and sporulation
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Tropheryma whipplei str. Twist
*
Renibacterium salmoninarum ATCC 33209

Site:
position = -45
score = 5.89377
sequence = TCGTGAATCTTTTCACAA

Gene: RSal33209_1621: WhiB-family transcriptional regulator involved in differentiation and sporulation
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Kytococcus sedentarius DSM 20547
WhiB-family transcriptional regulator involved in differentiation and sporulation
 
CRON 2.
ndh
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
*
Brevibacterium linens BL2

Site:
position = -122
score = 5.82342
sequence = TAGTGAAAGTTTTCACAA

Gene: BlinB01002401: NADH dehydrogenase (EC 1.6.99.3)
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333
*
Arthrobacter sp. FB24

Site:
position = -37
score = 6.00063
sequence = TAGTGAAGATTTTCACAA

Gene: Arth_1152: NADH dehydrogenase (EC 1.6.99.3)
*
Arthrobacter chlorophenolicus A6

Site:
position = -74
score = 6.00063
sequence = TAGTGAAGATTTTCACAA

Gene: Achl_1225: NADH dehydrogenase (EC 1.6.99.3)
*
Arthrobacter aurescens TC1

Site:
position = -37
score = 6.00063
sequence = TAGTGAAGATTTTCACAA

Gene: AAur_1268: NADH dehydrogenase (EC 1.6.99.3)
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Tropheryma whipplei str. Twist
*
Renibacterium salmoninarum ATCC 33209

Site:
position = -37
score = 6.0811
sequence = TCGTGAATATTTTCACAA

Gene: RSal33209_0337: NADH dehydrogenase (EC 1.6.99.3)
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Kytococcus sedentarius DSM 20547
NADH dehydrogenase (EC 1.6.99.3)
 
CRON 3.
pdhA
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Brevibacterium linens BL2
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333
*
Arthrobacter sp. FB24

Site:
position = -113
score = 5.56356
sequence = TTGTGAGTATGGTCACAA

Gene: Arth_1381: Pyruvate dehydrogenase E1 component, alpha subunit (EC 1.2.4.1)
*
Arthrobacter chlorophenolicus A6

Site:
position = -109
score = 4.8673
sequence = TTGTGAGTAGGGTCACAG

Gene: Achl_1399: Pyruvate dehydrogenase E1 component, alpha subunit (EC 1.2.4.1)
*
Arthrobacter aurescens TC1

Site:
position = -184
score = 5.35538
sequence = TTGTGAGTAGGGTCACAA

Gene: AAur_1521: Pyruvate dehydrogenase E1 component, alpha subunit (EC 1.2.4.1)
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Tropheryma whipplei str. Twist
*
Renibacterium salmoninarum ATCC 33209

Site:
position = -33
score = 4.68941
sequence = ATGTGAGTATCGTCACAG

Gene: RSal33209_0546: Pyruvate dehydrogenase E1 component, alpha subunit (EC 1.2.4.1)
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Kytococcus sedentarius DSM 20547
Pyruvate dehydrogenase E1 component, alpha subunit (EC 1.2.4.1)
pdhB
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Brevibacterium linens BL2
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333
 
Arthrobacter sp. FB24

Gene: Arth_1382: Pyruvate dehydrogenase E1 component, beta subunit (EC 1.2.4.1)
 
Arthrobacter chlorophenolicus A6

Gene: Achl_1400: Pyruvate dehydrogenase E1 component, beta subunit (EC 1.2.4.1)
 
Arthrobacter aurescens TC1

Gene: AAur_1522: Pyruvate dehydrogenase E1 component, beta subunit (EC 1.2.4.1)
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Tropheryma whipplei str. Twist
 
Renibacterium salmoninarum ATCC 33209

Gene: RSal33209_0547: Pyruvate dehydrogenase E1 component, beta subunit (EC 1.2.4.1)
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Kytococcus sedentarius DSM 20547
Pyruvate dehydrogenase E1 component, beta subunit (EC 1.2.4.1)
pdhC
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Brevibacterium linens BL2
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333
 
Arthrobacter sp. FB24

Gene: Arth_1383: Pyruvate dehydrogenase E2 (dihydrolipoamide acetyltransferase)
 
Arthrobacter chlorophenolicus A6

Gene: Achl_1401: Pyruvate dehydrogenase E2 (dihydrolipoamide acetyltransferase)
 
Arthrobacter aurescens TC1

Gene: AAur_1523: Pyruvate dehydrogenase E2 (dihydrolipoamide acetyltransferase)
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Tropheryma whipplei str. Twist
 
Renibacterium salmoninarum ATCC 33209

Gene: RSal33209_0548: Pyruvate dehydrogenase E2 (dihydrolipoamide acetyltransferase)
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Kytococcus sedentarius DSM 20547
Pyruvate dehydrogenase E2 (dihydrolipoamide acetyltransferase)
 
CRON 4.
pycA
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Brevibacterium linens BL2

Gene: BlinB01003013: Pyruvate carboxyl transferase (EC 6.4.1.1)
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333
*
Arthrobacter sp. FB24

Site:
position = -93
score = 5.04493
sequence = TTGTGATGGTCGACACAA

Gene: Arth_1546: Pyruvate carboxyl transferase (EC 6.4.1.1)
*
Arthrobacter chlorophenolicus A6

Site:
position = -93
score = 4.67154
sequence = CTGTGATGACTGACACAA

Gene: Achl_1547: Pyruvate carboxyl transferase (EC 6.4.1.1)
*2
Arthrobacter aurescens TC1

Site:
position = -93
score = 5.14622
sequence = TTGTGATGGTTGCCACAA

Gene: AAur_1686: Pyruvate carboxyl transferase (EC 6.4.1.1)

Gene: AAur_pTC10073: Pyruvate carboxyl transferase (EC 6.4.1.1)
 
Janibacter sp. HTCC2649

Gene: JNB_06549: Pyruvate carboxyl transferase (EC 6.4.1.1)
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Tropheryma whipplei str. Twist
 
Renibacterium salmoninarum ATCC 33209

Gene: RSal33209_2522: Pyruvate carboxyl transferase (EC 6.4.1.1)
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Kytococcus sedentarius DSM 20547
Pyruvate carboxyl transferase (EC 6.4.1.1)
 
CRON 5.
nuoA
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Brevibacterium linens BL2
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_3229: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
 
Arthrobacter sp. FB24
 
Arthrobacter chlorophenolicus A6
 
Arthrobacter aurescens TC1
*
Janibacter sp. HTCC2649

Site:
position = -216
score = 5.94541
sequence = TCGTGAAGACTTTCACAA

Gene: JNB_09029: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
 
Jonesia denitrificans DSM 20603

Gene: Jden_0539: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
 
Kocuria rhizophila DC2201
 
Tropheryma whipplei str. Twist
 
Renibacterium salmoninarum ATCC 33209
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Kytococcus sedentarius DSM 20547
NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
nuoB
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Brevibacterium linens BL2
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_3228: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
 
Arthrobacter sp. FB24
 
Arthrobacter chlorophenolicus A6
 
Arthrobacter aurescens TC1
 
Janibacter sp. HTCC2649

Gene: JNB_09024: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
 
Jonesia denitrificans DSM 20603

Gene: Jden_0540: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
 
Kocuria rhizophila DC2201
 
Tropheryma whipplei str. Twist
 
Renibacterium salmoninarum ATCC 33209
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Kytococcus sedentarius DSM 20547
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
nuoC
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Brevibacterium linens BL2
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_3227: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
 
Arthrobacter sp. FB24
 
Arthrobacter chlorophenolicus A6
 
Arthrobacter aurescens TC1
 
Janibacter sp. HTCC2649

Gene: JNB_09019: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
 
Jonesia denitrificans DSM 20603

Gene: Jden_0541: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
 
Kocuria rhizophila DC2201
 
Tropheryma whipplei str. Twist
 
Renibacterium salmoninarum ATCC 33209
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Kytococcus sedentarius DSM 20547
NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
nuoD
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Brevibacterium linens BL2
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_3226: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
 
Arthrobacter sp. FB24
 
Arthrobacter chlorophenolicus A6
 
Arthrobacter aurescens TC1
 
Janibacter sp. HTCC2649

Gene: JNB_09014: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
 
Jonesia denitrificans DSM 20603

Gene: Jden_0542: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
 
Kocuria rhizophila DC2201
 
Tropheryma whipplei str. Twist
 
Renibacterium salmoninarum ATCC 33209
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Kytococcus sedentarius DSM 20547
NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
nuoE
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Brevibacterium linens BL2
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_3225: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
 
Arthrobacter sp. FB24
 
Arthrobacter chlorophenolicus A6
 
Arthrobacter aurescens TC1
 
Janibacter sp. HTCC2649

Gene: JNB_09009: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
 
Jonesia denitrificans DSM 20603

Gene: Jden_0543: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
 
Kocuria rhizophila DC2201
 
Tropheryma whipplei str. Twist
 
Renibacterium salmoninarum ATCC 33209
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Kytococcus sedentarius DSM 20547
NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
nuoF
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Brevibacterium linens BL2
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_3224: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
 
Arthrobacter sp. FB24
 
Arthrobacter chlorophenolicus A6
 
Arthrobacter aurescens TC1
 
Janibacter sp. HTCC2649

Gene: JNB_09004: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
 
Jonesia denitrificans DSM 20603

Gene: Jden_0544: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
 
Kocuria rhizophila DC2201
 
Tropheryma whipplei str. Twist
 
Renibacterium salmoninarum ATCC 33209
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Kytococcus sedentarius DSM 20547
NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
nuoG
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Brevibacterium linens BL2
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_3223: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
 
Arthrobacter sp. FB24
 
Arthrobacter chlorophenolicus A6
 
Arthrobacter aurescens TC1
 
Janibacter sp. HTCC2649

Gene: JNB_08999: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
 
Jonesia denitrificans DSM 20603

Gene: Jden_0545: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
 
Kocuria rhizophila DC2201
 
Tropheryma whipplei str. Twist
 
Renibacterium salmoninarum ATCC 33209
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Kytococcus sedentarius DSM 20547
NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
nuoH
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Brevibacterium linens BL2
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_3222: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
 
Arthrobacter sp. FB24
 
Arthrobacter chlorophenolicus A6
 
Arthrobacter aurescens TC1
 
Janibacter sp. HTCC2649

Gene: JNB_08994: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
 
Jonesia denitrificans DSM 20603

Gene: Jden_0546: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
 
Kocuria rhizophila DC2201
 
Tropheryma whipplei str. Twist
 
Renibacterium salmoninarum ATCC 33209
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Kytococcus sedentarius DSM 20547
NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
nuoI
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Brevibacterium linens BL2
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_3221: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
 
Arthrobacter sp. FB24
 
Arthrobacter chlorophenolicus A6
 
Arthrobacter aurescens TC1
 
Janibacter sp. HTCC2649

Gene: JNB_08989: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
 
Jonesia denitrificans DSM 20603

Gene: Jden_0547: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
 
Kocuria rhizophila DC2201
 
Tropheryma whipplei str. Twist
 
Renibacterium salmoninarum ATCC 33209
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Kytococcus sedentarius DSM 20547
NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
nuoJ
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Brevibacterium linens BL2
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_3220: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
 
Arthrobacter sp. FB24
 
Arthrobacter chlorophenolicus A6
 
Arthrobacter aurescens TC1
 
Janibacter sp. HTCC2649

Gene: JNB_08984: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
 
Jonesia denitrificans DSM 20603

Gene: Jden_0548: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
 
Kocuria rhizophila DC2201
 
Tropheryma whipplei str. Twist
 
Renibacterium salmoninarum ATCC 33209
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Kytococcus sedentarius DSM 20547
NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
nuoK
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Brevibacterium linens BL2
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_3219: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
 
Arthrobacter sp. FB24
 
Arthrobacter chlorophenolicus A6
 
Arthrobacter aurescens TC1
 
Janibacter sp. HTCC2649

Gene: JNB_08979: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
 
Jonesia denitrificans DSM 20603

Gene: Jden_0549: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
 
Kocuria rhizophila DC2201
 
Tropheryma whipplei str. Twist
 
Renibacterium salmoninarum ATCC 33209
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Kytococcus sedentarius DSM 20547
NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
nuoL
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Brevibacterium linens BL2
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_3218: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
 
Arthrobacter sp. FB24
 
Arthrobacter chlorophenolicus A6
 
Arthrobacter aurescens TC1
 
Janibacter sp. HTCC2649

Gene: JNB_08974: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
 
Jonesia denitrificans DSM 20603

Gene: Jden_0550: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
 
Kocuria rhizophila DC2201
 
Tropheryma whipplei str. Twist
 
Renibacterium salmoninarum ATCC 33209
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Kytococcus sedentarius DSM 20547
NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
nuoM
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Brevibacterium linens BL2
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_3217: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Arthrobacter sp. FB24
 
Arthrobacter chlorophenolicus A6
 
Arthrobacter aurescens TC1
 
Janibacter sp. HTCC2649

Gene: JNB_08969: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Jonesia denitrificans DSM 20603

Gene: Jden_0551: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Kocuria rhizophila DC2201
 
Tropheryma whipplei str. Twist
 
Renibacterium salmoninarum ATCC 33209
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Kytococcus sedentarius DSM 20547
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
nuoN
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Brevibacterium linens BL2
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_3216: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
 
Arthrobacter sp. FB24
 
Arthrobacter chlorophenolicus A6
 
Arthrobacter aurescens TC1
 
Janibacter sp. HTCC2649

Gene: JNB_08964: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
 
Jonesia denitrificans DSM 20603

Gene: Jden_0552: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
 
Kocuria rhizophila DC2201
 
Tropheryma whipplei str. Twist
 
Renibacterium salmoninarum ATCC 33209
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Kytococcus sedentarius DSM 20547
NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
 
CRON 6.
rex
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Brevibacterium linens BL2

Gene: BlinB01001404: Redox-sensitive transcriptional regulator Rex
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333
 
Arthrobacter sp. FB24

Gene: Arth_3297: Redox-sensitive transcriptional regulator Rex
 
Arthrobacter chlorophenolicus A6

Gene: Achl_3096: Redox-sensitive transcriptional regulator Rex
 
Arthrobacter aurescens TC1

Gene: AAur_3294: Redox-sensitive transcriptional regulator Rex
*
Janibacter sp. HTCC2649

Site:
position = -72
score = 5.00547
sequence = TTGTGCATCGCTTCACAA

Gene: JNB_09294: Redox-sensitive transcriptional regulator Rex
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Tropheryma whipplei str. Twist
 
Renibacterium salmoninarum ATCC 33209

Gene: RSal33209_2713: Redox-sensitive transcriptional regulator Rex
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Kytococcus sedentarius DSM 20547
Redox-sensitive transcriptional regulator Rex
hemA
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Brevibacterium linens BL2

Gene: BlinB01001403: Glutamyl-tRNA reductase (EC 1.2.1.70)
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333
 
Arthrobacter sp. FB24

Gene: Arth_2773: Glutamyl-tRNA reductase (EC 1.2.1.70)
 
Arthrobacter chlorophenolicus A6

Gene: Achl_2495: Glutamyl-tRNA reductase (EC 1.2.1.70)
 
Arthrobacter aurescens TC1

Gene: AAur_2756: Glutamyl-tRNA reductase (EC 1.2.1.70)
 
Janibacter sp. HTCC2649

Gene: JNB_09289: Glutamyl-tRNA reductase (EC 1.2.1.70)
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Tropheryma whipplei str. Twist
 
Renibacterium salmoninarum ATCC 33209

Gene: RSal33209_1218: Glutamyl-tRNA reductase (EC 1.2.1.70)
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Kytococcus sedentarius DSM 20547
Glutamyl-tRNA reductase (EC 1.2.1.70)
hemD
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Brevibacterium linens BL2

Gene: BlinB01001402: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333
 
Arthrobacter sp. FB24
 
Arthrobacter chlorophenolicus A6
 
Arthrobacter aurescens TC1
 
Janibacter sp. HTCC2649

Gene: JNB_09279: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Tropheryma whipplei str. Twist
 
Renibacterium salmoninarum ATCC 33209
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Kytococcus sedentarius DSM 20547
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
hemB
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
 
Brevibacterium linens BL2

Gene: BlinB01001401: Porphobilinogen synthase (EC 4.2.1.24)
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333
 
Arthrobacter sp. FB24
 
Arthrobacter chlorophenolicus A6
 
Arthrobacter aurescens TC1
 
Janibacter sp. HTCC2649

Gene: JNB_09274: Porphobilinogen synthase (EC 4.2.1.24)
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Tropheryma whipplei str. Twist
 
Renibacterium salmoninarum ATCC 33209
 
Leifsonia xyli subsp. xyli str. CTCB07
 
Kytococcus sedentarius DSM 20547
Porphobilinogen synthase (EC 4.2.1.24)
 
CRON 7.
atpI
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382

Gene: CMM_1162: ATP synthase protein I
 
Brevibacterium linens BL2
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333
 2
Arthrobacter sp. FB24

Gene: Arth_2613: ATP synthase protein I

Gene: Arth_2612: ATP synthase protein I
 2
Arthrobacter chlorophenolicus A6

Gene: Achl_2346: ATP synthase protein I

Gene: Achl_2345: ATP synthase protein I
 
Arthrobacter aurescens TC1
*
Janibacter sp. HTCC2649

Site:
position = -49
score = 5.85523
sequence = TTGTGATAGTTTTCACAA

Gene: JNB_07044: ATP synthase protein I
 
Jonesia denitrificans DSM 20603
 2
Kocuria rhizophila DC2201

Gene: KRH_09760: ATP synthase protein I

Gene: KRH_09770: ATP synthase protein I
 
Tropheryma whipplei str. Twist

Gene: TW431: ATP synthase protein I
 2
Renibacterium salmoninarum ATCC 33209

Gene: RSal33209_1440: ATP synthase protein I

Gene: RSal33209_1441: ATP synthase protein I
 
Leifsonia xyli subsp. xyli str. CTCB07

Gene: Lxx06980: ATP synthase protein I
 
Kytococcus sedentarius DSM 20547
ATP synthase protein I
atpB
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382

Gene: CMM_1163: ATP synthase A chain (EC 3.6.3.14)
 
Brevibacterium linens BL2

Gene: BlinB01002455: ATP synthase A chain (EC 3.6.3.14)
 
Brachybacterium faecium DSM 4810

Gene: Bfae_19190: ATP synthase A chain (EC 3.6.3.14)
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_1301: ATP synthase A chain (EC 3.6.3.14)
 
Arthrobacter sp. FB24

Gene: Arth_2611: ATP synthase A chain (EC 3.6.3.14)
 
Arthrobacter chlorophenolicus A6

Gene: Achl_2344: ATP synthase A chain (EC 3.6.3.14)
 
Arthrobacter aurescens TC1

Gene: AAur_2600: ATP synthase A chain (EC 3.6.3.14)
 
Janibacter sp. HTCC2649

Gene: JNB_07039: ATP synthase A chain (EC 3.6.3.14)
 
Jonesia denitrificans DSM 20603

Gene: Jden_1780: ATP synthase A chain (EC 3.6.3.14)
 
Kocuria rhizophila DC2201

Gene: KRH_09780: ATP synthase A chain (EC 3.6.3.14)
 
Tropheryma whipplei str. Twist

Gene: TW430: ATP synthase A chain (EC 3.6.3.14)
 
Renibacterium salmoninarum ATCC 33209

Gene: RSal33209_1442: ATP synthase A chain (EC 3.6.3.14)
 
Leifsonia xyli subsp. xyli str. CTCB07

Gene: Lxx06990: ATP synthase A chain (EC 3.6.3.14)
 
Kytococcus sedentarius DSM 20547

Gene: Ksed_18260: ATP synthase A chain (EC 3.6.3.14)
ATP synthase A chain (EC 3.6.3.14)
atpE
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382

Gene: CMM_1164: ATP synthase C chain (EC 3.6.3.14)
 
Brevibacterium linens BL2

Gene: BlinB01002456: ATP synthase C chain (EC 3.6.3.14)
 
Brachybacterium faecium DSM 4810

Gene: Bfae_19180: ATP synthase C chain (EC 3.6.3.14)
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_1302: ATP synthase C chain (EC 3.6.3.14)
 
Arthrobacter sp. FB24

Gene: Arth_2610: ATP synthase C chain (EC 3.6.3.14)
 
Arthrobacter chlorophenolicus A6

Gene: Achl_2343: ATP synthase C chain (EC 3.6.3.14)
 
Arthrobacter aurescens TC1

Gene: AAur_2599: ATP synthase C chain (EC 3.6.3.14)
 
Janibacter sp. HTCC2649

Gene: JNB_07034: ATP synthase C chain (EC 3.6.3.14)
 
Jonesia denitrificans DSM 20603

Gene: Jden_1779: ATP synthase C chain (EC 3.6.3.14)
 
Kocuria rhizophila DC2201

Gene: KRH_09790: ATP synthase C chain (EC 3.6.3.14)
 
Tropheryma whipplei str. Twist

Gene: TW429: ATP synthase C chain (EC 3.6.3.14)
 
Renibacterium salmoninarum ATCC 33209

Gene: RSal33209_1443: ATP synthase C chain (EC 3.6.3.14)
 
Leifsonia xyli subsp. xyli str. CTCB07

Gene: Lxx07000: ATP synthase C chain (EC 3.6.3.14)
 
Kytococcus sedentarius DSM 20547

Gene: Ksed_18250: ATP synthase C chain (EC 3.6.3.14)
ATP synthase C chain (EC 3.6.3.14)
atpF
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382

Gene: CMM_1165: ATP synthase B chain (EC 3.6.3.14)
 
Brevibacterium linens BL2

Gene: BlinB01002457: ATP synthase B chain (EC 3.6.3.14)
 
Brachybacterium faecium DSM 4810

Gene: Bfae_19170: ATP synthase B chain (EC 3.6.3.14)
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_1303: ATP synthase B chain (EC 3.6.3.14)
 
Arthrobacter sp. FB24

Gene: Arth_2609: ATP synthase B chain (EC 3.6.3.14)
 
Arthrobacter chlorophenolicus A6

Gene: Achl_2342: ATP synthase B chain (EC 3.6.3.14)
 
Arthrobacter aurescens TC1

Gene: AAur_2598: ATP synthase B chain (EC 3.6.3.14)
 
Janibacter sp. HTCC2649

Gene: JNB_07029: ATP synthase B chain (EC 3.6.3.14)
 
Jonesia denitrificans DSM 20603

Gene: Jden_1778: ATP synthase B chain (EC 3.6.3.14)
 
Kocuria rhizophila DC2201

Gene: KRH_09800: ATP synthase B chain (EC 3.6.3.14)
 
Tropheryma whipplei str. Twist

Gene: TW428: ATP synthase B chain (EC 3.6.3.14)
 
Renibacterium salmoninarum ATCC 33209

Gene: RSal33209_1444: ATP synthase B chain (EC 3.6.3.14)
 
Leifsonia xyli subsp. xyli str. CTCB07

Gene: Lxx07010: ATP synthase B chain (EC 3.6.3.14)
 
Kytococcus sedentarius DSM 20547

Gene: Ksed_18240: ATP synthase B chain (EC 3.6.3.14)
ATP synthase B chain (EC 3.6.3.14)
atpH
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382

Gene: CMM_1166: ATP synthase delta chain (EC 3.6.3.14)
 
Brevibacterium linens BL2

Gene: BlinB01002458: ATP synthase delta chain (EC 3.6.3.14)
 
Brachybacterium faecium DSM 4810

Gene: Bfae_19160: ATP synthase delta chain (EC 3.6.3.14)
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_1304: ATP synthase delta chain (EC 3.6.3.14)
 
Arthrobacter sp. FB24

Gene: Arth_2608: ATP synthase delta chain (EC 3.6.3.14)
 
Arthrobacter chlorophenolicus A6

Gene: Achl_2341: ATP synthase delta chain (EC 3.6.3.14)
 
Arthrobacter aurescens TC1
 
Janibacter sp. HTCC2649

Gene: JNB_07024: ATP synthase delta chain (EC 3.6.3.14)
 
Jonesia denitrificans DSM 20603

Gene: Jden_1777: ATP synthase delta chain (EC 3.6.3.14)
 
Kocuria rhizophila DC2201

Gene: KRH_09810: ATP synthase delta chain (EC 3.6.3.14)
 
Tropheryma whipplei str. Twist

Gene: TW427: ATP synthase delta chain (EC 3.6.3.14)
 
Renibacterium salmoninarum ATCC 33209

Gene: RSal33209_1445: ATP synthase delta chain (EC 3.6.3.14)
 
Leifsonia xyli subsp. xyli str. CTCB07

Gene: Lxx07020: ATP synthase delta chain (EC 3.6.3.14)
 
Kytococcus sedentarius DSM 20547

Gene: Ksed_18230: ATP synthase delta chain (EC 3.6.3.14)
ATP synthase delta chain (EC 3.6.3.14)
atpA
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382

Gene: CMM_1167: ATP synthase alpha chain (EC 3.6.3.14)
 
Brevibacterium linens BL2

Gene: BlinB01002459: ATP synthase alpha chain (EC 3.6.3.14)
 
Brachybacterium faecium DSM 4810

Gene: Bfae_19150: ATP synthase alpha chain (EC 3.6.3.14)
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_1305: ATP synthase alpha chain (EC 3.6.3.14)
 
Arthrobacter sp. FB24

Gene: Arth_2607: ATP synthase alpha chain (EC 3.6.3.14)
 
Arthrobacter chlorophenolicus A6

Gene: Achl_2340: ATP synthase alpha chain (EC 3.6.3.14)
 
Arthrobacter aurescens TC1

Gene: AAur_2596: ATP synthase alpha chain (EC 3.6.3.14)
 
Janibacter sp. HTCC2649

Gene: JNB_07019: ATP synthase alpha chain (EC 3.6.3.14)
 
Jonesia denitrificans DSM 20603

Gene: Jden_1776: ATP synthase alpha chain (EC 3.6.3.14)
 
Kocuria rhizophila DC2201

Gene: KRH_09820: ATP synthase alpha chain (EC 3.6.3.14)
 
Tropheryma whipplei str. Twist

Gene: TWT426: ATP synthase alpha chain (EC 3.6.3.14)
 
Renibacterium salmoninarum ATCC 33209

Gene: RSal33209_1446: ATP synthase alpha chain (EC 3.6.3.14)
 
Leifsonia xyli subsp. xyli str. CTCB07

Gene: Lxx07030: ATP synthase alpha chain (EC 3.6.3.14)
 
Kytococcus sedentarius DSM 20547

Gene: Ksed_18220: ATP synthase alpha chain (EC 3.6.3.14)
ATP synthase alpha chain (EC 3.6.3.14)
atpG
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382

Gene: CMM_1168: ATP synthase gamma chain (EC 3.6.3.14)
 
Brevibacterium linens BL2

Gene: BlinB01002460: ATP synthase gamma chain (EC 3.6.3.14)
 
Brachybacterium faecium DSM 4810

Gene: Bfae_19140: ATP synthase gamma chain (EC 3.6.3.14)
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_1306: ATP synthase gamma chain (EC 3.6.3.14)
 
Arthrobacter sp. FB24

Gene: Arth_2606: ATP synthase gamma chain (EC 3.6.3.14)
 
Arthrobacter chlorophenolicus A6

Gene: Achl_2339: ATP synthase gamma chain (EC 3.6.3.14)
 
Arthrobacter aurescens TC1

Gene: AAur_2595: ATP synthase gamma chain (EC 3.6.3.14)
 
Janibacter sp. HTCC2649

Gene: JNB_07014: ATP synthase gamma chain (EC 3.6.3.14)
 
Jonesia denitrificans DSM 20603

Gene: Jden_1775: ATP synthase gamma chain (EC 3.6.3.14)
 
Kocuria rhizophila DC2201

Gene: KRH_09830: ATP synthase gamma chain (EC 3.6.3.14)
 
Tropheryma whipplei str. Twist

Gene: TW425: ATP synthase gamma chain (EC 3.6.3.14)
 
Renibacterium salmoninarum ATCC 33209

Gene: RSal33209_1447: ATP synthase gamma chain (EC 3.6.3.14)
 
Leifsonia xyli subsp. xyli str. CTCB07

Gene: Lxx07040: ATP synthase gamma chain (EC 3.6.3.14)
 
Kytococcus sedentarius DSM 20547

Gene: Ksed_18210: ATP synthase gamma chain (EC 3.6.3.14)
ATP synthase gamma chain (EC 3.6.3.14)
atpD
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382

Gene: CMM_1169: ATP synthase beta chain (EC 3.6.3.14)
 
Brevibacterium linens BL2

Gene: BlinB01002461: ATP synthase beta chain (EC 3.6.3.14)
 
Brachybacterium faecium DSM 4810

Gene: Bfae_19130: ATP synthase beta chain (EC 3.6.3.14)
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_1307: ATP synthase beta chain (EC 3.6.3.14)
 
Arthrobacter sp. FB24

Gene: Arth_2605: ATP synthase beta chain (EC 3.6.3.14)
 
Arthrobacter chlorophenolicus A6

Gene: Achl_2338: ATP synthase beta chain (EC 3.6.3.14)
 
Arthrobacter aurescens TC1

Gene: AAur_2594: ATP synthase beta chain (EC 3.6.3.14)
 
Janibacter sp. HTCC2649

Gene: JNB_07009: ATP synthase beta chain (EC 3.6.3.14)
 
Jonesia denitrificans DSM 20603

Gene: Jden_1774: ATP synthase beta chain (EC 3.6.3.14)
 
Kocuria rhizophila DC2201

Gene: KRH_09840: ATP synthase beta chain (EC 3.6.3.14)
 
Tropheryma whipplei str. Twist

Gene: TW424: ATP synthase beta chain (EC 3.6.3.14)
 
Renibacterium salmoninarum ATCC 33209

Gene: RSal33209_1448: ATP synthase beta chain (EC 3.6.3.14)
 
Leifsonia xyli subsp. xyli str. CTCB07

Gene: Lxx07050: ATP synthase beta chain (EC 3.6.3.14)
 
Kytococcus sedentarius DSM 20547

Gene: Ksed_18200: ATP synthase beta chain (EC 3.6.3.14)
ATP synthase beta chain (EC 3.6.3.14)
atpC
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382

Gene: CMM_1170: ATP synthase epsilon chain (EC 3.6.3.14)
 
Brevibacterium linens BL2

Gene: BlinB01002462: ATP synthase epsilon chain (EC 3.6.3.14)
 
Brachybacterium faecium DSM 4810

Gene: Bfae_19120: ATP synthase epsilon chain (EC 3.6.3.14)
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_1308: ATP synthase epsilon chain (EC 3.6.3.14)
 
Arthrobacter sp. FB24

Gene: Arth_2604: ATP synthase epsilon chain (EC 3.6.3.14)
 
Arthrobacter chlorophenolicus A6

Gene: Achl_2337: ATP synthase epsilon chain (EC 3.6.3.14)
 
Arthrobacter aurescens TC1
 
Janibacter sp. HTCC2649

Gene: JNB_07004: ATP synthase epsilon chain (EC 3.6.3.14)
 
Jonesia denitrificans DSM 20603

Gene: Jden_1773: ATP synthase epsilon chain (EC 3.6.3.14)
 
Kocuria rhizophila DC2201

Gene: KRH_09850: ATP synthase epsilon chain (EC 3.6.3.14)
 
Tropheryma whipplei str. Twist

Gene: TW423: ATP synthase epsilon chain (EC 3.6.3.14)
 
Renibacterium salmoninarum ATCC 33209

Gene: RSal33209_1449: ATP synthase epsilon chain (EC 3.6.3.14)
 
Leifsonia xyli subsp. xyli str. CTCB07

Gene: Lxx07060: ATP synthase epsilon chain (EC 3.6.3.14)
 
Kytococcus sedentarius DSM 20547

Gene: Ksed_18170: ATP synthase epsilon chain (EC 3.6.3.14)
ATP synthase epsilon chain (EC 3.6.3.14)
 
CRON 8.
pckA
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382

Gene: CMM_1473: Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
*
Brevibacterium linens BL2

Site:
position = -126
score = 4.72873
sequence = TTGTGATCCAATGCACAT

Gene: BlinB01001106: Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
 
Brachybacterium faecium DSM 4810
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_3601: Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
*
Arthrobacter sp. FB24

Site:
position = -167
score = 5.13421
sequence = ATGTGACCTTACTCACAA

Gene: Arth_0667: Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
*
Arthrobacter chlorophenolicus A6

Site:
position = -121
score = 3.99767
sequence = TCGTAGAATTTTCCACAA

Gene: Achl_0814: Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
*
Arthrobacter aurescens TC1

Site:
position = -166
score = 4.13183
sequence = ACGTGACCTTCGTCACTT

Gene: AAur_0832: Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
 
Janibacter sp. HTCC2649

Gene: JNB_11124: Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201

Gene: KRH_03260: Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
 
Tropheryma whipplei str. Twist
*
Renibacterium salmoninarum ATCC 33209

Site:
position = -174
score = 4.78398
sequence = ATGTGACCTTAGTCACAG

Gene: RSal33209_0029: Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
 
Leifsonia xyli subsp. xyli str. CTCB07

Gene: Lxx04240: Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
 
Kytococcus sedentarius DSM 20547
Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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