Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog CsoR - Nocardiaceae

Properties
Regulator type: Transcription factor
Regulator family: CsoR
Regulation mode: repressor
Biological process: Copper resistance
Effector: Copper ion, (Cu+)
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 7 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Rhodococcus erythropolis PR4 5 2
Nocardia farcinica IFM 10152 3 2
Rhodococcus opacus B4 4 2
Rhodococcus sp. RHA1 5 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
copZ
*
Rhodococcus erythropolis PR4

Site:
position = -87
score = 5.19082
sequence = ATACCCCCTGGGGGTAC

Gene: RER_43570: Putative copper chaperone CopZ
 
Nocardia farcinica IFM 10152
*2
Rhodococcus opacus B4

Gene: ROP_33290: Putative copper chaperone CopZ

Site:
position = -82
score = 5.2597
sequence = ATACGGTAGGGGGGTAT

Gene: ROP_pROB01-02400: Putative copper chaperone CopZ
*
Rhodococcus sp. RHA1

Site:
position = -63
score = 5.2597
sequence = ATACGGTAGGGGGGTAT

Gene: RHA1_ro03535: Putative copper chaperone CopZ
Putative copper chaperone CopZ
ROP_33300
 
Rhodococcus erythropolis PR4

Gene: RER_43580: Putative secreted protein
*
Nocardia farcinica IFM 10152

Site:
position = -27
score = 5.64735
sequence = GTACCCTAGGGGGGTAT

Gene: nfa1610: Putative secreted protein
 2
Rhodococcus opacus B4

Gene: ROP_33300: Putative secreted protein

Gene: ROP_pROB01-02390: Putative secreted protein
 
Rhodococcus sp. RHA1

Gene: RHA1_ro03536: Putative secreted protein
Putative secreted protein
copA
 
Rhodococcus erythropolis PR4

Gene: RER_43590: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Nocardia farcinica IFM 10152

Gene: nfa1600: Copper-translocating P-type ATPase (EC 3.6.3.4)
 2
Rhodococcus opacus B4

Gene: ROP_33310: Copper-translocating P-type ATPase (EC 3.6.3.4)

Gene: ROP_pROB01-02380: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Rhodococcus sp. RHA1

Gene: RHA1_ro03537: Copper-translocating P-type ATPase (EC 3.6.3.4)
Copper-translocating P-type ATPase (EC 3.6.3.4)
csoR
 
Rhodococcus erythropolis PR4

Gene: RER_05710: Copper resistance transcriptional regulator CsoR, CsoR family
*
Nocardia farcinica IFM 10152

Site:
position = -60
score = 5.64735
sequence = GTACCCTAGGGGGGTAT

Gene: nfa8420: Copper resistance transcriptional regulator CsoR, CsoR family
*2
Rhodococcus opacus B4

Gene: ROP_33320: Copper resistance transcriptional regulator CsoR, CsoR family

Site:
position = -61
score = 4.87913
sequence = ATACCCCGGGCGGGCAT

Gene: ROP_pROB01-02370: Copper resistance transcriptional regulator CsoR, CsoR family
 
Rhodococcus sp. RHA1

Gene: RHA1_ro03538: Copper resistance transcriptional regulator CsoR, CsoR family
Copper resistance transcriptional regulator CsoR, CsoR family
copB
 
Rhodococcus erythropolis PR4
 
Nocardia farcinica IFM 10152
 
Rhodococcus opacus B4

Gene: ROP_33330: Copper-translocating P-type ATPase (EC 3.6.3.4)
 
Rhodococcus sp. RHA1

Gene: RHA1_ro03539: Copper-translocating P-type ATPase (EC 3.6.3.4)
Copper-translocating P-type ATPase (EC 3.6.3.4)
RER_05700
*
Rhodococcus erythropolis PR4

Site:
position = -49
score = 5.89858
sequence = ATACCCTAGGGGGGTAT

Gene: RER_05700: Hypothetical protein
 
Nocardia farcinica IFM 10152
 
Rhodococcus opacus B4
 
Rhodococcus sp. RHA1
Hypothetical protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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