Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Rex - Frankineae/Propionibacterineae/Pseudonocardiaceae

Properties
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 26 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Saccharopolyspora erythraea NRRL 2338 21 3
Saccharomonospora viridis DSM 43017 20 3
Propionibacterium acnes KPA171202
Nocardioides sp. JS614 21 3
Nakamurella multipartita DSM 44233 19 3
Frankia sp. EAN1pec 21 2
Frankia sp. CcI3 21 2
Actinosynnema mirum DSM 43827 21 4
Acidothermus cellulolyticus 11B 22 3
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
COG0644
*
Saccharopolyspora erythraea NRRL 2338

Site:
position = -68
score = 5.66
sequence = TAGTGAACTCGTTCACAA

Gene: SACE_6903: Putative NAD-dependent reductase, COG0644
 
Saccharomonospora viridis DSM 43017
 
Propionibacterium acnes KPA171202

Gene: PPA1938: Putative NAD-dependent reductase, COG0644
 
Nocardioides sp. JS614
*
Nakamurella multipartita DSM 44233

Site:
position = -96
score = 5.99542
sequence = TCGTGAACGAATTCACAA

Gene: Namu_0973: Putative NAD-dependent reductase, COG0644
*
Frankia sp. EAN1pec

Site:
position = -85
score = 5.48087
sequence = TCGTGAAGAATTTCACGA

Gene: Franean1_6095: Putative NAD-dependent reductase, COG0644
*
Frankia sp. CcI3

Site:
position = -92
score = 5.48087
sequence = TCGTGAAGAATTTCACGA

Gene: Francci3_0537: Putative NAD-dependent reductase, COG0644
*
Actinosynnema mirum DSM 43827

Site:
position = -27
score = 5.67581
sequence = TTGTGAACAAGTGCACAA

Gene: Amir_6683: Putative NAD-dependent reductase, COG0644
*
Acidothermus cellulolyticus 11B

Site:
position = -61
score = 5.60727
sequence = TCGTGAAGAATTTCACAA

Gene: Acel_0266: Putative NAD-dependent reductase, COG0644
Putative NAD-dependent reductase, COG0644
nuoA
 
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_6902: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
*
Saccharomonospora viridis DSM 43017

Site:
position = -195
score = 5.70802
sequence = TTGTGAAGGTATTCACAT

Site:
position = -226
score = 6.00948
sequence = TTGTGAATGGCTTCACAA

Gene: Svir_03160: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
 
Propionibacterium acnes KPA171202

Gene: PPA1936: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
*
Nocardioides sp. JS614

Site:
position = -87
score = 5.55245
sequence = TCGTGATTGTGTTCACAA

Gene: Noca_0520: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
 
Nakamurella multipartita DSM 44233

Gene: Namu_0974: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
 
Frankia sp. EAN1pec

Gene: Franean1_6094: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
 
Frankia sp. CcI3

Gene: Francci3_0538: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
*
Actinosynnema mirum DSM 43827

Site:
position = -135
score = 6.08345
sequence = TTGTGAAGGCTTTCACAA

Site:
position = -167
score = 5.37792
sequence = ATGTGAATCACTTCACAA

Gene: Amir_6682: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
 
Acidothermus cellulolyticus 11B

Gene: Acel_0267: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
nuoB
 
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_6901: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
 
Saccharomonospora viridis DSM 43017

Gene: Svir_03170: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
 
Propionibacterium acnes KPA171202

Gene: PPA1935: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
 
Nocardioides sp. JS614

Gene: Noca_0521: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
 
Nakamurella multipartita DSM 44233

Gene: Namu_0975: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
 
Frankia sp. EAN1pec

Gene: Franean1_6093: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
 
Frankia sp. CcI3

Gene: Francci3_0539: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
 
Actinosynnema mirum DSM 43827

Gene: Amir_6681: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
 
Acidothermus cellulolyticus 11B

Gene: Acel_0268: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
nuoC
 
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_6900: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
 
Saccharomonospora viridis DSM 43017

Gene: Svir_03180: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
 
Propionibacterium acnes KPA171202

Gene: PPA1934: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
 
Nocardioides sp. JS614

Gene: Noca_0522: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
 
Nakamurella multipartita DSM 44233

Gene: Namu_0976: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
 
Frankia sp. EAN1pec

Gene: Franean1_6092: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
 
Frankia sp. CcI3

Gene: Francci3_0540: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
 
Actinosynnema mirum DSM 43827

Gene: Amir_6680: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
 
Acidothermus cellulolyticus 11B

Gene: Acel_0269: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
nuoD
 
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_6899: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
 
Saccharomonospora viridis DSM 43017

Gene: Svir_03190: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
 
Propionibacterium acnes KPA171202

Gene: PPA1933: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
 
Nocardioides sp. JS614

Gene: Noca_0523: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
 
Nakamurella multipartita DSM 44233

Gene: Namu_0977: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
 
Frankia sp. EAN1pec

Gene: Franean1_6091: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
 
Frankia sp. CcI3

Gene: Francci3_0541: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
 
Actinosynnema mirum DSM 43827

Gene: Amir_6679: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
 
Acidothermus cellulolyticus 11B

Gene: Acel_0270: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
nuoE
 
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_6898: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
 
Saccharomonospora viridis DSM 43017

Gene: Svir_03200: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
 
Propionibacterium acnes KPA171202

Gene: PPA1932: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
 
Nocardioides sp. JS614

Gene: Noca_0524: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
 
Nakamurella multipartita DSM 44233

Gene: Namu_0978: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
 
Frankia sp. EAN1pec

Gene: Franean1_6090: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
 
Frankia sp. CcI3

Gene: Francci3_0542: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
 
Actinosynnema mirum DSM 43827

Gene: Amir_6678: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
 
Acidothermus cellulolyticus 11B

Gene: Acel_0271: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
nuoF
 
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_6897: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
 
Saccharomonospora viridis DSM 43017

Gene: Svir_03210: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
 
Propionibacterium acnes KPA171202

Gene: PPA1931: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
 
Nocardioides sp. JS614

Gene: Noca_0525: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
 
Nakamurella multipartita DSM 44233

Gene: Namu_0979: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
 
Frankia sp. EAN1pec

Gene: Franean1_6089: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
 
Frankia sp. CcI3

Gene: Francci3_0543: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
 
Actinosynnema mirum DSM 43827

Gene: Amir_6677: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
 
Acidothermus cellulolyticus 11B

Gene: Acel_0272: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
nuoG
 
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_6896: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
 
Saccharomonospora viridis DSM 43017

Gene: Svir_03220: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
 
Propionibacterium acnes KPA171202

Gene: PPA1930: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
 
Nocardioides sp. JS614

Gene: Noca_0526: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
 
Nakamurella multipartita DSM 44233

Gene: Namu_0980: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
 
Frankia sp. EAN1pec

Gene: Franean1_6088: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
 
Frankia sp. CcI3

Gene: Francci3_0544: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
 
Actinosynnema mirum DSM 43827

Gene: Amir_6676: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
 
Acidothermus cellulolyticus 11B

Gene: Acel_0273: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
nuoH
 
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_6895: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
 
Saccharomonospora viridis DSM 43017

Gene: Svir_03230: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
 
Propionibacterium acnes KPA171202

Gene: PPA1929: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
 
Nocardioides sp. JS614

Gene: Noca_0527: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
 
Nakamurella multipartita DSM 44233

Gene: Namu_0981: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
 
Frankia sp. EAN1pec

Gene: Franean1_6087: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
 
Frankia sp. CcI3

Gene: Francci3_0545: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
 
Actinosynnema mirum DSM 43827

Gene: Amir_6675: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
 
Acidothermus cellulolyticus 11B

Gene: Acel_0274: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
nuoI
 
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_6894: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
 
Saccharomonospora viridis DSM 43017

Gene: Svir_03240: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
 
Propionibacterium acnes KPA171202

Gene: PPA1928: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
 
Nocardioides sp. JS614

Gene: Noca_0528: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
 
Nakamurella multipartita DSM 44233

Gene: Namu_0982: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
 
Frankia sp. EAN1pec

Gene: Franean1_6086: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
 
Frankia sp. CcI3

Gene: Francci3_0546: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
 
Actinosynnema mirum DSM 43827

Gene: Amir_6674: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
 
Acidothermus cellulolyticus 11B

Gene: Acel_0275: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
nuoJ
 
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_6893: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
 
Saccharomonospora viridis DSM 43017

Gene: Svir_03250: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
 
Propionibacterium acnes KPA171202

Gene: PPA1926: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
 
Nocardioides sp. JS614

Gene: Noca_0529: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
 
Nakamurella multipartita DSM 44233

Gene: Namu_0983: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
 
Frankia sp. EAN1pec

Gene: Franean1_6085: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
 
Frankia sp. CcI3

Gene: Francci3_0547: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
 
Actinosynnema mirum DSM 43827

Gene: Amir_6673: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
 
Acidothermus cellulolyticus 11B

Gene: Acel_0276: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
nuoK
 
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_6892: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
 
Saccharomonospora viridis DSM 43017

Gene: Svir_03260: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
 
Propionibacterium acnes KPA171202

Gene: PPA1925: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
 
Nocardioides sp. JS614

Gene: Noca_0530: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
 
Nakamurella multipartita DSM 44233

Gene: Namu_0984: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
 
Frankia sp. EAN1pec

Gene: Franean1_6084: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
 
Frankia sp. CcI3

Gene: Francci3_0548: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
 
Actinosynnema mirum DSM 43827

Gene: Amir_6672: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
 
Acidothermus cellulolyticus 11B

Gene: Acel_0277: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
nuoL
 
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_6891: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
 
Saccharomonospora viridis DSM 43017

Gene: Svir_03270: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
 
Propionibacterium acnes KPA171202

Gene: PPA1924: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
 
Nocardioides sp. JS614

Gene: Noca_0531: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
 
Nakamurella multipartita DSM 44233

Gene: Namu_0985: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
 
Frankia sp. EAN1pec

Gene: Franean1_6083: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
 
Frankia sp. CcI3

Gene: Francci3_0549: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
 
Actinosynnema mirum DSM 43827

Gene: Amir_6671: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
 
Acidothermus cellulolyticus 11B

Gene: Acel_0278: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
nuoM
 
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_6890: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Saccharomonospora viridis DSM 43017

Gene: Svir_03280: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Propionibacterium acnes KPA171202

Gene: PPA1923: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Nocardioides sp. JS614

Gene: Noca_0532: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Nakamurella multipartita DSM 44233

Gene: Namu_0986: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Frankia sp. EAN1pec

Gene: Franean1_6082: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Frankia sp. CcI3

Gene: Francci3_0550: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Actinosynnema mirum DSM 43827

Gene: Amir_6670: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
 
Acidothermus cellulolyticus 11B

Gene: Acel_0279: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
nuoN
 
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_6889: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
 
Saccharomonospora viridis DSM 43017

Gene: Svir_03290: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
 
Propionibacterium acnes KPA171202

Gene: PPA1922: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
 
Nocardioides sp. JS614

Gene: Noca_0533: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
 
Nakamurella multipartita DSM 44233

Gene: Namu_0987: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
 
Frankia sp. EAN1pec

Gene: Franean1_6081: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
 
Frankia sp. CcI3

Gene: Francci3_0551: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
 
Actinosynnema mirum DSM 43827

Gene: Amir_6669: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
 
Acidothermus cellulolyticus 11B

Gene: Acel_0280: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
COG0142
 
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_6888: Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)
 
Saccharomonospora viridis DSM 43017
 
Propionibacterium acnes KPA171202

Gene: PPA1921: Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)
 
Nocardioides sp. JS614

Gene: Noca_0534: Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)
 
Nakamurella multipartita DSM 44233

Gene: Namu_0988: Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)
 
Frankia sp. EAN1pec

Gene: Franean1_6080: Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)
 
Frankia sp. CcI3

Gene: Francci3_0552: Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)
 
Actinosynnema mirum DSM 43827

Gene: Amir_6668: Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)
 
Acidothermus cellulolyticus 11B

Gene: Acel_0281: Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)
Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)
 
CRON 2.
rex
*
Saccharopolyspora erythraea NRRL 2338

Site:
position = -277
score = 5.89317
sequence = TTGTGCATGTGTTCACAA

Gene: SACE_6947: Redox-sensitive transcriptional regulator Rex
*
Saccharomonospora viridis DSM 43017

Site:
position = -120
score = 5.39709
sequence = TTGTGCCTACGTTCACAA

Gene: Svir_02840: Redox-sensitive transcriptional regulator Rex
 
Propionibacterium acnes KPA171202
*
Nocardioides sp. JS614

Site:
position = -118
score = 4.44406
sequence = TTGTTCTCCTGTTCACAA

Gene: Noca_0493: Redox-sensitive transcriptional regulator Rex
*
Nakamurella multipartita DSM 44233

Site:
position = -110
score = 5.89919
sequence = TTGTGCACGCGTTCACGA

Gene: Namu_0919: Redox-sensitive transcriptional regulator Rex
*
Frankia sp. EAN1pec

Site:
position = -226
score = 5.88534
sequence = TCGTGAATACCTTCACGA

Gene: Franean1_6132: Redox-sensitive transcriptional regulator Rex
*
Frankia sp. CcI3

Site:
position = -159
score = 5.75667
sequence = TCGTGAATCCCTTCACGA

Gene: Francci3_0484: Redox-sensitive transcriptional regulator Rex
*
Actinosynnema mirum DSM 43827

Site:
position = -95
score = 5.6235
sequence = TTGTGCGTGCGTTCACAA

Gene: Amir_6731: Redox-sensitive transcriptional regulator Rex
*
Acidothermus cellulolyticus 11B

Site:
position = -59
score = 5.6235
sequence = TTGTGCGTGCGTTCACAA

Gene: Acel_0239: Redox-sensitive transcriptional regulator Rex
Redox-sensitive transcriptional regulator Rex
hemA
 
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_6946: Glutamyl-tRNA reductase (EC 1.2.1.70)
 
Saccharomonospora viridis DSM 43017

Gene: Svir_02850: Glutamyl-tRNA reductase (EC 1.2.1.70)
 
Propionibacterium acnes KPA171202

Gene: PPA0307: Glutamyl-tRNA reductase (EC 1.2.1.70)
 2
Nocardioides sp. JS614

Gene: Noca_1962: Glutamyl-tRNA reductase (EC 1.2.1.70)

Gene: Noca_0494: Glutamyl-tRNA reductase (EC 1.2.1.70)
 
Nakamurella multipartita DSM 44233

Gene: Namu_1549: Glutamyl-tRNA reductase (EC 1.2.1.70)
 
Frankia sp. EAN1pec

Gene: Franean1_6131: Glutamyl-tRNA reductase (EC 1.2.1.70)
 
Frankia sp. CcI3

Gene: Francci3_0485: Glutamyl-tRNA reductase (EC 1.2.1.70)
 
Actinosynnema mirum DSM 43827

Gene: Amir_6730: Glutamyl-tRNA reductase (EC 1.2.1.70)
 
Acidothermus cellulolyticus 11B

Gene: Acel_0238: Glutamyl-tRNA reductase (EC 1.2.1.70)
Glutamyl-tRNA reductase (EC 1.2.1.70)
hemC
 
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_6945: Porphobilinogen deaminase (EC 2.5.1.61)
 
Saccharomonospora viridis DSM 43017

Gene: Svir_02860: Porphobilinogen deaminase (EC 2.5.1.61)
 
Propionibacterium acnes KPA171202

Gene: PPA0304: Porphobilinogen deaminase (EC 2.5.1.61)
 
Nocardioides sp. JS614

Gene: Noca_0495: Porphobilinogen deaminase (EC 2.5.1.61)
 
Nakamurella multipartita DSM 44233

Gene: Namu_1544: Porphobilinogen deaminase (EC 2.5.1.61)
 
Frankia sp. EAN1pec

Gene: Franean1_6130: Porphobilinogen deaminase (EC 2.5.1.61)
 
Frankia sp. CcI3

Gene: Francci3_0486: Porphobilinogen deaminase (EC 2.5.1.61)
 
Actinosynnema mirum DSM 43827

Gene: Amir_6729: Porphobilinogen deaminase (EC 2.5.1.61)
 
Acidothermus cellulolyticus 11B

Gene: Acel_0237: Porphobilinogen deaminase (EC 2.5.1.61)
Porphobilinogen deaminase (EC 2.5.1.61)
hemD
 
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_6944: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
 
Saccharomonospora viridis DSM 43017

Gene: Svir_02870: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
 
Propionibacterium acnes KPA171202
 
Nocardioides sp. JS614

Gene: Noca_0496: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
 
Nakamurella multipartita DSM 44233

Gene: Namu_0920: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
 
Frankia sp. EAN1pec

Gene: Franean1_6129: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
 
Frankia sp. CcI3

Gene: Francci3_0487: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
 
Actinosynnema mirum DSM 43827

Gene: Amir_6728: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
 
Acidothermus cellulolyticus 11B

Gene: Acel_0236: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
hemB
 
Saccharopolyspora erythraea NRRL 2338

Gene: SACE_6943: Porphobilinogen synthase (EC 4.2.1.24)
 
Saccharomonospora viridis DSM 43017

Gene: Svir_02880: Porphobilinogen synthase (EC 4.2.1.24)
 
Propionibacterium acnes KPA171202

Gene: PPA0302: Porphobilinogen synthase (EC 4.2.1.24)
 
Nocardioides sp. JS614

Gene: Noca_0497: Porphobilinogen synthase (EC 4.2.1.24)
 
Nakamurella multipartita DSM 44233

Gene: Namu_1542: Porphobilinogen synthase (EC 4.2.1.24)
 
Frankia sp. EAN1pec

Gene: Franean1_6128: Porphobilinogen synthase (EC 4.2.1.24)
 
Frankia sp. CcI3

Gene: Francci3_0488: Porphobilinogen synthase (EC 4.2.1.24)
 
Actinosynnema mirum DSM 43827

Gene: Amir_6727: Porphobilinogen synthase (EC 4.2.1.24)
 
Acidothermus cellulolyticus 11B

Gene: Acel_0235: Porphobilinogen synthase (EC 4.2.1.24)
Porphobilinogen synthase (EC 4.2.1.24)
 
CRON 3.
whiB
*
Saccharopolyspora erythraea NRRL 2338

Site:
position = -104
score = 6.00976
sequence = TCGTGAAAGCATTCACAA

Site:
position = -75
score = 5.36099
sequence = CCGTGAAAGCATTCACAA

Gene: SACE_6426: WhiB-family transcriptional regulator involved in differentiation and sporulation
*
Saccharomonospora viridis DSM 43017

Site:
position = -87
score = 6.00976
sequence = TCGTGAAAGCATTCACAA

Gene: Svir_30700: WhiB-family transcriptional regulator involved in differentiation and sporulation
 
Propionibacterium acnes KPA171202

Gene: PPA1264: WhiB-family transcriptional regulator involved in differentiation and sporulation
*
Nocardioides sp. JS614

Site:
position = -100
score = 5.32085
sequence = TCGTGAATGCGTTCACTT

Gene: Noca_1713: WhiB-family transcriptional regulator involved in differentiation and sporulation
*
Nakamurella multipartita DSM 44233

Site:
position = -109
score = 5.70605
sequence = ATGTGAAAGCATTCACAA

Gene: Namu_1412: WhiB-family transcriptional regulator involved in differentiation and sporulation
 
Frankia sp. EAN1pec

Gene: Franean1_0971: WhiB-family transcriptional regulator involved in differentiation and sporulation
 
Frankia sp. CcI3

Gene: Francci3_3759: WhiB-family transcriptional regulator involved in differentiation and sporulation
*
Actinosynnema mirum DSM 43827

Site:
position = -85
score = 6.00976
sequence = TCGTGAAAGCATTCACAA

Gene: Amir_6289: WhiB-family transcriptional regulator involved in differentiation and sporulation
*
Acidothermus cellulolyticus 11B

Site:
position = -158
score = 5.58442
sequence = TCGTGAAACTATTCACAA

Gene: Acel_0560: WhiB-family transcriptional regulator involved in differentiation and sporulation
WhiB-family transcriptional regulator involved in differentiation and sporulation
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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