Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog PdxR - Enterococcaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Pyridoxine biosynthesis
Effector: Pyridoxal-5-phosphate
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 5 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Enterococcus faecalis V583 6 4
Enterococcus faecium DO 3 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
pdxK2
*
Enterococcus faecalis V583

Site:
position = -89
score = 8.66151
sequence = AAGTGGCTG-(10)-CTGCCAATT

Gene: EF1969: Novel pyridoxal kinase, thiD family (EC 2.7.1.35)
*
Enterococcus faecium DO

Site:
position = -84
score = 8.59561
sequence = AATTGGATG-(10)-ATGCCAATT

Gene: EfaeDRAFT_2581: Novel pyridoxal kinase, thiD family (EC 2.7.1.35)
Novel pyridoxal kinase, thiD family (EC 2.7.1.35)
pdxU2
 
Enterococcus faecalis V583

Gene: EF1968: Substrate-specific component PdxU2 of predicted pyridoxin-related ECF transporter
 
Enterococcus faecium DO

Gene: EfaeDRAFT_2582: Substrate-specific component PdxU2 of predicted pyridoxin-related ECF transporter
Substrate-specific component PdxU2 of predicted pyridoxin-related ECF transporter
COG4475
 
Enterococcus faecalis V583

Gene: EF1967: Hypothetical protein ywlG
 
Enterococcus faecium DO

Gene: EfaeDRAFT_2583: Hypothetical protein ywlG
Hypothetical protein ywlG
 
CRON 2.
EF1937
*
Enterococcus faecalis V583

Site:
position = -54
score = 9.12562
sequence = AATTGGCTG-(10)-CAGTCAATT

Gene: EF1937: Acetyltransferase (EC 2.3.1.-)
 
Enterococcus faecium DO
Acetyltransferase (EC 2.3.1.-)
 
CRON 3.
pdxK
*
Enterococcus faecalis V583

Site:
position = -86
score = 9.41603
sequence = AATTGGCTG-(10)-AAGCCAATT

Gene: EF0202: Novel pyridoxal kinase, ThiD family (EC 2.7.1.35)
 
Enterococcus faecium DO
Novel pyridoxal kinase, ThiD family (EC 2.7.1.35)
 
CRON 4.
pdxR
*
Enterococcus faecalis V583

Site:
position = -43
score = 8.2985
sequence = AACTGGATT-(10)-CATCCAATT

Gene: EF2426: Predicted transcriptional regulator of pyridoxine metabolism, GntR family
 
Enterococcus faecium DO

Gene: EfaeDRAFT_1355: Predicted transcriptional regulator of pyridoxine metabolism, GntR family
Predicted transcriptional regulator of pyridoxine metabolism, GntR family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD