Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog PdxR - Thermoanaerobacterales

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Pyridoxine biosynthesis
Effector: Pyridoxal-5-phosphate
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 4 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Anaerocellum thermophilum DSM 6725 3 2
Caldicellulosiruptor saccharolyticus DSM 8903 3 2
Carboxydothermus hydrogenoformans Z-2901
Moorella thermoacetica ATCC 39073
Thermoanaerobacter ethanolicus X514
Thermoanaerobacter italicus Ab9
Thermoanaerobacter tengcongensis MB4
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
pdxS
*
Anaerocellum thermophilum DSM 6725

Site:
position = -109
score = 11.2275
sequence = TGTATCGATACA-(72)-TATATCGATACG

Gene: Athe_1909: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
*
Caldicellulosiruptor saccharolyticus DSM 8903

Site:
position = -108
score = 11.2275
sequence = TGTATCGATACA-(71)-TATATCGATACG

Gene: Csac_1036: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
 
Carboxydothermus hydrogenoformans Z-2901

Gene: CHY_2703: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
 
Moorella thermoacetica ATCC 39073

Gene: Moth_0009: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
 
Thermoanaerobacter ethanolicus X514

Gene: Teth514_2241: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
 
Thermoanaerobacter italicus Ab9

Gene: Thit_1264: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
 
Thermoanaerobacter tengcongensis MB4

Gene: TTE0823: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
pdxT
 
Anaerocellum thermophilum DSM 6725

Gene: Athe_1908: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
 
Caldicellulosiruptor saccharolyticus DSM 8903

Gene: Csac_1037: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
 
Carboxydothermus hydrogenoformans Z-2901

Gene: CHY_2702: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
 
Moorella thermoacetica ATCC 39073

Gene: Moth_0010: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
 
Thermoanaerobacter ethanolicus X514

Gene: Teth514_2240: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
 
Thermoanaerobacter italicus Ab9

Gene: Thit_1263: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
 
Thermoanaerobacter tengcongensis MB4

Gene: TTE0822: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
 
CRON 2.
pdxR
*
Anaerocellum thermophilum DSM 6725

Site:
position = -79
score = 9.86904
sequence = CGTATCGATATA-(72)-TGTATCGATACA

Gene: Athe_1910: Pyridoxine biosynthesis transcriptional regulator PdxR, GntR family
*
Caldicellulosiruptor saccharolyticus DSM 8903

Site:
position = -78
score = 9.86904
sequence = CGTATCGATATA-(71)-TGTATCGATACA

Gene: Csac_1035: Pyridoxine biosynthesis transcriptional regulator PdxR, GntR family
 
Carboxydothermus hydrogenoformans Z-2901
 
Moorella thermoacetica ATCC 39073
 
Thermoanaerobacter ethanolicus X514
 
Thermoanaerobacter italicus Ab9
 
Thermoanaerobacter tengcongensis MB4
Pyridoxine biosynthesis transcriptional regulator PdxR, GntR family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
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