Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog MdcY - Moraxellaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Malonate metabolism
Effector:
Phylum: Proteobacteria/Gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 2 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Acinetobacter baumannii AB0057
Acinetobacter sp. ADP1
Psychrobacter arcticum 273-4 10 2
Psychrobacter sp. PRwf-1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
mdcL
 
Acinetobacter baumannii AB0057

Gene: AB57_1661: malonate transporter subunit
 
Acinetobacter sp. ADP1

Gene: ACIAD1760: malonate transporter subunit
*
Psychrobacter arcticum 273-4

Site:
position = -222
score = 5.17791
sequence = TTGTATACAA

Gene: Psyc_1148: malonate transporter subunit
 
Psychrobacter sp. PRwf-1
malonate transporter subunit
mdcM
 
Acinetobacter baumannii AB0057

Gene: AB57_1662: Malonate transporter subunit
 
Acinetobacter sp. ADP1

Gene: ACIAD1761: Malonate transporter subunit
 
Psychrobacter arcticum 273-4

Gene: Psyc_1147: Malonate transporter subunit
 
Psychrobacter sp. PRwf-1
Malonate transporter subunit
mdcA
 
Acinetobacter baumannii AB0057

Gene: AB57_1654: Malonate decarboxylase alpha subunit
 
Acinetobacter sp. ADP1

Gene: ACIAD1753: Malonate decarboxylase alpha subunit
 
Psychrobacter arcticum 273-4

Gene: Psyc_1146: Malonate decarboxylase alpha subunit
 
Psychrobacter sp. PRwf-1
Malonate decarboxylase alpha subunit
mdcC
 
Acinetobacter baumannii AB0057

Gene: AB57_1656: Malonate decarboxylase, delta subunit
 
Acinetobacter sp. ADP1

Gene: ACIAD1755: Malonate decarboxylase, delta subunit
 
Psychrobacter arcticum 273-4

Gene: Psyc_1145: Malonate decarboxylase, delta subunit
 
Psychrobacter sp. PRwf-1
Malonate decarboxylase, delta subunit
mdcD
 
Acinetobacter baumannii AB0057

Gene: AB57_1657: Malonate decarboxylase beta subunit
 
Acinetobacter sp. ADP1

Gene: ACIAD1756: Malonate decarboxylase beta subunit
 
Psychrobacter arcticum 273-4

Gene: Psyc_1144: Malonate decarboxylase beta subunit
 
Psychrobacter sp. PRwf-1
Malonate decarboxylase beta subunit
mdcE
 
Acinetobacter baumannii AB0057

Gene: AB57_1658: Malonate decarboxylase gamma subunit
 
Acinetobacter sp. ADP1

Gene: ACIAD1757: Malonate decarboxylase gamma subunit
 
Psychrobacter arcticum 273-4

Gene: Psyc_1143: Malonate decarboxylase gamma subunit
 
Psychrobacter sp. PRwf-1
Malonate decarboxylase gamma subunit
mdcG
 
Acinetobacter baumannii AB0057

Gene: AB57_1659: holo-ACP synthase, malonate decarboxylase-specific
 
Acinetobacter sp. ADP1

Gene: ACIAD1758: holo-ACP synthase, malonate decarboxylase-specific
 
Psychrobacter arcticum 273-4

Gene: Psyc_1142: holo-ACP synthase, malonate decarboxylase-specific
 
Psychrobacter sp. PRwf-1
holo-ACP synthase, malonate decarboxylase-specific
mdcB
 
Acinetobacter baumannii AB0057

Gene: AB57_1655: Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25)
 
Acinetobacter sp. ADP1

Gene: ACIAD1754: Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25)
 
Psychrobacter arcticum 273-4

Gene: Psyc_1141: Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25)
 
Psychrobacter sp. PRwf-1
Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25)
mdcH
 
Acinetobacter baumannii AB0057

Gene: AB57_1660: Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39)
 
Acinetobacter sp. ADP1

Gene: ACIAD1759: Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39)
 
Psychrobacter arcticum 273-4

Gene: Psyc_1140: Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39)
 
Psychrobacter sp. PRwf-1
Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39)
 
CRON 2.
mdcY
 
Acinetobacter baumannii AB0057
 
Acinetobacter sp. ADP1
*
Psychrobacter arcticum 273-4

Site:
position = -21
score = 5.17791
sequence = TTGTATACAA

Gene: Psyc_1149: Transcriptional regulator of malonate metabolism, GntR family
 
Psychrobacter sp. PRwf-1
Transcriptional regulator of malonate metabolism, GntR family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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