Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Gdia_0881 - Rhodospirillales

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Alpha
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 4 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Acetobacter pasteurianus IFO 3283-01
Azospirillum sp. B510
Magnetospirillum magneticum AMB-1
Magnetospirillum magnetotacticum MS-1
Rhodospirillum centenum SW
Rhodospirillum rubrum ATCC 11170
Granulibacter bethesdensis CGDNIH1
Gluconobacter oxydans 621H
Gluconacetobacter diazotrophicus PAl 5 7 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
AZL_a06310
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510

Gene: AZL_a06310: 3-hydroxybutyrate dehydrogenase
 
Magnetospirillum magneticum AMB-1
 
Magnetospirillum magnetotacticum MS-1
 
Rhodospirillum centenum SW
 
Rhodospirillum rubrum ATCC 11170
 
Granulibacter bethesdensis CGDNIH1
 
Gluconobacter oxydans 621H
*
Gluconacetobacter diazotrophicus PAl 5

Site:
position = -57
score = 5.16028
sequence = ATTGGCCGGACCAAT

Site:
position = -78
score = 5.14264
sequence = ATTGGTCTGACCAAT

Gene: Gdia_0880: 3-hydroxybutyrate dehydrogenase
3-hydroxybutyrate dehydrogenase
mhpD
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510
 
Magnetospirillum magneticum AMB-1
 
Magnetospirillum magnetotacticum MS-1
 
Rhodospirillum centenum SW
 
Rhodospirillum rubrum ATCC 11170
 
Granulibacter bethesdensis CGDNIH1
 
Gluconobacter oxydans 621H
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_0879: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
COG4948
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510
 
Magnetospirillum magneticum AMB-1
 
Magnetospirillum magnetotacticum MS-1
 
Rhodospirillum centenum SW
 
Rhodospirillum rubrum ATCC 11170
 
Granulibacter bethesdensis CGDNIH1
 
Gluconobacter oxydans 621H
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_0878: Mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing protein
Gdia_0877
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510
 
Magnetospirillum magneticum AMB-1
 
Magnetospirillum magnetotacticum MS-1
 
Rhodospirillum centenum SW
 
Rhodospirillum rubrum ATCC 11170
 
Granulibacter bethesdensis CGDNIH1
 
Gluconobacter oxydans 621H
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_0877: short-chain dehydrogenase/reductase SDR
short-chain dehydrogenase/reductase SDR
Gdia_0876
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510
 
Magnetospirillum magneticum AMB-1
 
Magnetospirillum magnetotacticum MS-1
 
Rhodospirillum centenum SW
 
Rhodospirillum rubrum ATCC 11170
 
Granulibacter bethesdensis CGDNIH1
 
Gluconobacter oxydans 621H
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_0876: RbsD or FucU transporter
RbsD or FucU transporter
Gdia_0875
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510
 
Magnetospirillum magneticum AMB-1
 
Magnetospirillum magnetotacticum MS-1
 
Rhodospirillum centenum SW
 
Rhodospirillum rubrum ATCC 11170
 
Granulibacter bethesdensis CGDNIH1
 
Gluconobacter oxydans 621H
 
Gluconacetobacter diazotrophicus PAl 5

Gene: Gdia_0875: amidohydrolase 2
amidohydrolase 2
 
CRON 2.
Gdia_0881
 
Acetobacter pasteurianus IFO 3283-01
 
Azospirillum sp. B510
 
Magnetospirillum magneticum AMB-1
 
Magnetospirillum magnetotacticum MS-1
 
Rhodospirillum centenum SW
 
Rhodospirillum rubrum ATCC 11170
 
Granulibacter bethesdensis CGDNIH1
 
Gluconobacter oxydans 621H
*
Gluconacetobacter diazotrophicus PAl 5

Site:
position = -94
score = 5.16028
sequence = ATTGGTCCGGCCAAT

Site:
position = -73
score = 5.14264
sequence = ATTGGTCAGACCAAT

Gene: Gdia_0881: Transcription regulator, GntR family
Transcription regulator, GntR family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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