Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog CD3353 - Clostridia-2

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 1 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Clostridium bartlettii DSM 16795
Clostridium difficile 630 1 1
Clostridium hiranonis DSM 13275
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
COG3382
 
Clostridium bartlettii DSM 16795
*
Clostridium difficile 630

Site:
position = -102
score = 11.8962
sequence = AAAAGTGGTTC-(14)-AAAAATGGAAC-(6)-ATCCACTTTTA

Gene: CD3354: hypothetical protein
 
Clostridium hiranonis DSM 13275
hypothetical protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD