Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog Bcep1808_4966 - Burkholderia

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 2 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Burkholderia cepacia AMMD
Burkholderia glumae BGR1
Burkholderia mallei ATCC 23344
Burkholderia phymatum STM815 1 1
Burkholderia pseudomallei K96243
Burkholderia sp. 383
Burkholderia vietnamiensis G4 1 1
Burkholderia xenovorans LB400
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
PF11142
 
Burkholderia cepacia AMMD

Gene: Bamb_2583: Protein of unknown function DUF2917
 
Burkholderia glumae BGR1
 
Burkholderia mallei ATCC 23344
*
Burkholderia phymatum STM815

Site:
position = -119
score = 19.393
sequence = AACTGTCAGG-(8)-CTGCACAGTT-(7)-AACTGTTCAG-(0)-TACTGTGCAT

Gene: Bphy_0549: Protein of unknown function DUF2917
 
Burkholderia pseudomallei K96243
 
Burkholderia sp. 383
 
Burkholderia vietnamiensis G4
 
Burkholderia xenovorans LB400
Protein of unknown function DUF2917
 
CRON 2.
PF01810
 
Burkholderia cepacia AMMD
 
Burkholderia glumae BGR1

Gene: bglu_2g22270: Lysine-type exporter protein (LYSE/YGGA)
 
Burkholderia mallei ATCC 23344
 
Burkholderia phymatum STM815
 
Burkholderia pseudomallei K96243
 
Burkholderia sp. 383
*
Burkholderia vietnamiensis G4

Site:
position = -490
score = 16.7808
sequence = AAGTGTTCGG-(8)-GCGAACACTT-(7)-GATTGTTCGG-(0)-TTGTGTTCAT

Gene: Bcep1808_4965: Lysine-type exporter protein (LYSE/YGGA)
 
Burkholderia xenovorans LB400
Lysine-type exporter protein (LYSE/YGGA)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD